| Sequence 1: | NP_648567.2 | Gene: | CG4328 / 39405 | FlyBaseID: | FBgn0036274 | Length: | 544 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001020338.2 | Gene: | lmx1bb / 554360 | ZFINID: | ZDB-GENE-050114-2 | Length: | 375 | Species: | Danio rerio |
| Alignment Length: | 414 | Identity: | 163/414 - (39%) |
|---|---|---|---|
| Similarity: | 215/414 - (51%) | Gaps: | 113/414 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 174 PL--GMASNSGMGMELGLAMASPQLSQCAH------CCQPICDRYIMRVVENSFHEGCLKCTACS 230
Fly 231 LHLVHSCYAREGKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLK 295
Fly 296 KGEQYVVKQGQLFCRFDYEKEVEML-------------------------QGYDFYGDELFPPKL 335
Fly 336 DGR--RGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK 398
Fly 399 IQKKAKQEPPSKGASDSQDSQESLDSSLATKIKDEAHS-----DSESQ---LESPYSTT--SDGL 453
Fly 454 TRMRCTIKDEQEQVPFNCME-----------------TNKENCNKNSEPILNTILGLSYATFQQL 501
Fly 502 MGPFAQTPMINPIDRLYSMQSSYF 525 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG4328 | NP_648567.2 | LIM1_Lmx1b | 199..251 | CDD:188757 | 29/57 (51%) |
| LIM | 259..313 | CDD:295319 | 28/53 (53%) | ||
| COG5576 | <332..439 | CDD:227863 | 58/113 (51%) | ||
| HOX | 341..393 | CDD:197696 | 44/51 (86%) | ||
| lmx1bb | NP_001020338.2 | LIM1_Lmx1b | 33..85 | CDD:188757 | 27/51 (53%) |
| LIM2_Lmx1a_Lmx1b | 92..146 | CDD:188764 | 28/53 (53%) | ||
| Homeobox | 197..250 | CDD:278475 | 45/52 (87%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6784 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 248 | 1.000 | Inparanoid score | I3233 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D323174at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001820 | |
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_105498 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24208 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3844 |
| SonicParanoid | 1 | 1.000 | - | - | X1182 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 12 | 11.960 | |||||