Protein Alignment CG4328 and Dr

DIOPT Version :10

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Alignment Length: 538
• Identity: 97/538 - (18%)
• Similarity: 160/538 - (29%)
• Gaps: 206/538 - (38%)

  Fly    39 LLLNGNERMLTTPTTAATSVVVAAGRSASTKAGVAHNDKMASVSRTVNGSCSNHNSSNSSSSSST 103
            :.:.|..:.:|:||...         |::|.||          :..:..|.||..|::.|:.||.
  Fly     9 MTVTGLRQTMTSPTVPP---------SSNTPAG----------NLIITSSSSNSGSNSGSNMSSG 54

  Fly   104 NSSSNMAIN---KQPMGM-------GPGT-------------------------GTGMGTGTGHG 133
            |.:|:...|   ..|.|:       .|..                         ...:.....|.
  Fly    55 NMTSSNLTNLSPSHPAGLNALASPTSPSALLLAHQQHLLQQHQQHQQQQQQQQQAAALQLAAVHP 119

  Fly   134 PGPPNHTHCNRITLGECSLNGMDGFATPAAPPS-ASNTPQAPLGMASNSGMGMELGLAMASPQLS 197
            |.  :|.|.....|...|:..:.....|..||: |::.||             .|..:.|:..:|
  Fly   120 PA--HHLHKTTSRLSNFSVASLLADTRPRTPPNQAADGPQ-------------NLTSSAATSPIS 169

  Fly   198 QCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGK-----LYCRVDYERLYIRN 257
            |.:....|.......:|..|:||...:...|..|...|:..|...:     ...|...::...|.
  Fly   170 QASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADARA 234

  Fly   258 HC-------------LGCGL-------------------------KIAADELVMRCHE------- 277
            :.             ||..|                         ::..||.:::.||
  Fly   235 NSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDEEE 299

  Fly   278 ---------NV---------------------------FHLKCFACVVCGALLKKGEQYV----- 301
                     |.                           .|::  :.::..|.|..|...:
  Fly   300 DSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQ--STILSPAALASGHVPIRPTPF 362

  Fly   302 ---------------------VKQGQLFCRFDYEKEVEMLQGYDFYGDELFPPK----LDGRRGP 341
                                 .:|...|      ....|..|..|.||...||:    |...:..
  Fly   363 SALAAAAVAWTGMGGGVPWPGTRQMPPF------GPPGMFPGAGFGGDANEPPRIKCNLRKHKPN 421

  Fly   342 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRI----VQVWFQNQRAKVKKIQ-- 400
            ::|||...|||..:.:..|.  .|....:.|.  .:...|||:    |::||||:|||.|::|
  Fly   422 RKPRTPFTTQQLLSLEKKFR--EKQYLSIAER--AEFSSSLRLTETQVKIWFQNRRAKAKRLQEA 482

  Fly   401 --KKAKQEPPSKGASDSQ 416
              :|.|.....:||..:|
  Fly   483 EIEKIKMAALGRGAPGAQ 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	10/56 (18%)
		LIM	259..313	CDD:413332	14/160 (9%)
		COG5576	<332..439	CDD:227863	30/97 (31%)
		HOX	341..393	CDD:197696	17/55 (31%)
Dr	NP_477324.1	Homeodomain	422..478	CDD:459649	20/59 (34%)