DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and zfh1

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:434 Identity:104/434 - (23%)
Similarity:164/434 - (37%) Gaps:83/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NGSCSNHNSSNSSSSSSTNSSSNMAINKQPMGMGPGTGTGMG--TGTGHG-------PGPPNHTH 141
            :||.|:|.:|....|.....::|.|:.|: :...||:.:...  :.:.||       |..|...|
  Fly   395 SGSFSSHMTSKKCISMGLKLNNNRALLKR-LEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLPH 458

  Fly   142 CNRITLGECSLNGMDGFATPAA-PPSASNTPQAPL------GMASNSGMG-----------MELG 188
            .......:..:.|  |.|.||. ||...|...|.|      .||:.:|:.           ::|.
  Fly   459 PMSYFASDAQVQG--GSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDPRVHPYSIQRLLQLS 521

  Fly   189 LA-------MASPQLSQCAHCCQPICD--RYIMRVVENSFHE--GCLKCTACSLHLVHSCYAREG 242
            .|       ....|..|..|..:...|  :.:|.:.|....|  ...:.|..:..:     .||.
  Fly   522 AAGQQQREEEREEQQKQQQHDEEETPDEPKLVMDIEEPETKEMAPTPEATEAATPI-----KREE 581

  Fly   243 KLYCRVDYERLYIRNHCLGC---GLKIAAD-ELVMRCHENVFH---LKCFAC------------- 287
            ......|.|.....:..:..   .|.:|.: :..:..|..|.|   |:|..|             
  Fly   582 SREASPDPESYRSSSQAIKQEQEPLNVAEERQTPVEEHAPVEHAADLRCSRCSKQFNHPTELVQH 646

  Fly   288 --VVCGALLKKGEQ-YVVKQGQLFCRFDYEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRTILN 349
              |:||.:.::.|| :..:|...|......:|.|..:..|.   |..|.:..|.| ..|.||.:|
  Fly   647 EKVLCGLIKEELEQHFQQQQATSFALASASEEDEEDEEMDV---EEEPRQESGER-KVRVRTAIN 707

  Fly   350 TQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSKGASD 414
            .:|::..|..:.::.:|.|.....:|....|..|:|||||||.|::.:|:|  :.|...:.||:.
  Fly   708 EEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKMQ--SFQNNQAAGAAP 770

  Fly   415 SQ--DSQESL---DSSLATKIK-DEAHSDSESQLESPYSTTSDG 452
            ..  |||.||   |..|...:| |.....|||  ..||.....|
  Fly   771 PMPIDSQASLTREDQPLDLSVKRDPLTPKSES--SPPYIAPPSG 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 9/55 (16%)
LIM 259..313 CDD:413332 15/76 (20%)
COG5576 <332..439 CDD:227863 36/112 (32%)
HOX 341..393 CDD:197696 18/51 (35%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 19/54 (35%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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