Protein Alignment CG4328 and Dfd

DIOPT Version :10

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Alignment Length: 574
• Identity: 120/574 - (20%)
• Similarity: 170/574 - (29%)
• Gaps: 195/574 - (33%)

  Fly    42 NGNERMLTTPTTAATSVVVAAGRSASTKAG------VAHNDKMASVSRTVNGSCSNHNSSNSSSS 100
            ||:..|  |.:|...|..|..|....:..|      ..|...|.... .|:...::|::.:|.|.
  Fly    40 NGHYSM--TASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHPAD-MVSDYMAHHHNPHSHSH 101

  Fly   101 SSTNS----SSNMAINKQPMGMGPGTGTGMGTGTGHGPGPPNHTHCNRITLGECSLNGMDGFATP 161
            |.|:|    .||.||:........|..:.....|     ||:|.|.:.......||    |:...
  Fly   102 SHTHSLPHHHSNSAISGHHQASAGGYSSNYANAT-----PPSHPHSHPHAHPHQSL----GYYVH 157

  Fly   162 AAP-----------PSASNTPQAPLGMASNSGMGMELGLAMASPQLSQCAHCCQPICDRYIMRVV 215
            .||           |:....|.|.:...||.|.|...|..:....:...|
  Fly   158 HAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSA--------------- 207

  Fly   216 ENSFH----------EGCLKCTACSLHLVHS--------CYAREGKLYCRVDYERLYIRNHCLGC 262
             |.::          .|.:..|....|..||        |.:.|......:..:.|
  Fly   208 -NGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQEL--------- 262

  Fly   263 GLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFC------RFDYEKEVEML- 320
            |||     |..|..|.|               ..|:|......:|.|      ..|..:|..::
  Fly   263 GLK-----LEKRIEEAV---------------PAGQQLQELGMRLRCDDMGSENDDMSEEDRLML 307

  Fly   321 ----------QGYDFYGD-----ELFPPKLDGRR-----------------------GPKRPRTI 347
                      ...|..||     :|.....||.|                       .|||.||.
  Fly   308 DRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTA 372

  Fly   348 LNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK-------------- 398
            ....|....:..|..:....|:.|..:|....||.|.:::||||:|.|.||
  Fly   373 YTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437

  Fly   399 ---------IQKKAKQEPPSKGASDSQDSQES-LDSSLATKIKDEA-HSDSESQLES-------- 444
                     :.||..:...||....:|..|:| ...:..|.:.:|. .|||   |||
  Fly   438 VDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDS---LESIGDVSSSL 499

  Fly   445 ---PY-----STTSDGLTRMRCTIKDEQEQVPFNCM--ETNKENCNKNSEPILN 488
               ||     .|||        :....|:.:..|..  ..|..|.|.|:...||
  Fly   500 GNPPYIPAAPETTS--------SYPGSQQHLSNNNNNGSGNNNNNNNNNNSNLN 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	9/69 (13%)
		LIM	259..313	CDD:413332	11/59 (19%)
		COG5576	<332..439	CDD:227863	35/154 (23%)
		HOX	341..393	CDD:197696	17/51 (33%)
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	18/55 (33%)