DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and zen

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:186 Identity:44/186 - (23%)
Similarity:73/186 - (39%) Gaps:23/186 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 DELFP--PKLDGRRGP-KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWF 389
            ||..|  |..|.:|.. ||.||...:.|....:..|:.:....|..|..:|:...|..|.|::||
  Fly    74 DENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWF 138

  Fly   390 QNQRAKVKK-IQKKAKQEPPSKGASDSQDSQESLDSSLATKIKDEAHSDSESQLESPYSTTSDGL 453
            ||:|.|.|| ||  ..:||.|........:::|....:..::.        |..:.|...|:...
  Fly   139 QNRRMKFKKDIQ--GHREPKSNAKLAQPQAEQSAHRGIVKRLM--------SYSQDPREGTAAAE 193

  Fly   454 TRMRCTIKDEQEQVPFNCMETNKENCNKNSEPILNTILGL-SYATFQQLMGPFAQT 508
            .|....:.....:..:...:..|...:.|:        |: |.|...:::...|||
  Fly   194 KRPMMAVAPVNPKPDYQASQKMKTEASTNN--------GMCSSADLSEILEHLAQT 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757
LIM 259..313 CDD:413332
COG5576 <332..439 CDD:227863 30/110 (27%)
HOX 341..393 CDD:197696 16/52 (31%)
zenNP_476793.1 Homeodomain 91..147 CDD:459649 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.

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