Protein Alignment CG4328 and Awh

DIOPT Version :10

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Alignment Length: 271
• Identity: 90/271 - (33%)
• Similarity: 138/271 - (50%)
• Gaps: 20/271 - (7%)

  Fly   195 QLSQCAHCCQPICDRYIMRVVENSFHEGCLKC--TACSLHLVHSCYAREGKLYCRVDYERLYIRN 257
            :|..||.|.:||.||:.:.|...|:|..||:|  ..|.|....||:.||.::||:.||.:.: ..
  Fly     4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNF-GA 67

  Fly   258 HCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQG 322
            .|..|...|:|.:.|.|..|.||||.||||..||..|..|||:.:...::.|:..|   :|.::|
  Fly    68 KCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHY---LETVEG 129

  Fly   323 YDFYGDELFPPKLDG----RRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLR 383
            .....||    ..||    :...||.||....:|.:..:|:|::...|..:..|.:|..||||.|
  Fly   130 GTTSSDE----GCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKR 190

  Fly   384 IVQVWFQNQRAKVKK---IQKKAKQEPPSKGASDSQDSQESLDSSLATKIKDEAH-SDSESQLES 444
            :.||||||.||:.||   ..|...:||  :|:|.::.....|..|.....::..| :.|::.|..
  Fly   191 VTQVWFQNSRARQKKHIHAGKNKIREP--EGSSFARHINLQLTYSFQNNAQNPMHLNGSKAGLYP 253

  Fly   445 PYSTTSDGLTR 455
            .:.::.|.|::
  Fly   254 THESSMDELSQ 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	22/53 (42%)
		LIM	259..313	CDD:413332	22/53 (42%)
		COG5576	<332..439	CDD:227863	35/114 (31%)
		HOX	341..393	CDD:197696	21/51 (41%)
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	21/52 (40%)
		LIM2_AWH	69..123	CDD:188765	22/53 (42%)
		Homeodomain	149..205	CDD:459649	23/55 (42%)