DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and ISL1

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_002193.2 Gene:ISL1 / 3670 HGNCID:6132 Length:349 Species:Homo sapiens


Alignment Length:294 Identity:91/294 - (30%)
Similarity:141/294 - (47%) Gaps:49/294 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LSQCAHCCQPICDRYIMRVVEN-SFHEGCLKCTACSLHLVHS--CYAREGKLYCRVDYERLY-IR 256
            :|.|..|...|.|:||:||..: .:|..||||..|:.:|..|  |:.|:||.||:.||.||| |:
Human    14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIK 78

  Fly   257 NHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQ 321
              |..|.:..:.::.|||....|:|::||.||.|...|..|:::.:::..||||.|::.......
Human    79 --CAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVERASL 141

  Fly   322 GYDFYGDELFP-----------PKLDGRRGPKRP------------RTILNTQQRRAFKASFEVS 363
            |   .||.|.|           ..:..|:...||            ||:||.:|....:..:..:
Human   142 G---AGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAAN 203

  Fly   364 PKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK---IQKKAKQEPPS--------KGASDSQD 417
            |:|...::|.|.:.||||.|:::|||||:|.|.||   :.|:.:|:.|:        .|......
Human   204 PRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDKTNIQGMTGTPMVAA 268

  Fly   418 SQESLDSSLATKIKDEAHSDSESQLESPYSTTSD 451
            |.|..|..|      :|:.......:.|:...||
Human   269 SPERHDGGL------QANPVEVQSYQPPWKVLSD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 23/54 (43%)
LIM 259..313 CDD:413332 18/53 (34%)
COG5576 <332..439 CDD:227863 36/140 (26%)
HOX 341..393 CDD:197696 21/63 (33%)
ISL1NP_002193.2 LIM1_Isl 17..71 CDD:188752 22/53 (42%)
LIM domain 20..73 23/52 (44%)
LIM2_Isl 79..133 CDD:188760 18/53 (34%)
LIM domain 82..136 18/53 (34%)
HOX 181..237 CDD:197696 21/55 (38%)
Homeodomain 184..243 23/58 (40%)
LIM-binding domain (LID). /evidence=ECO:0000250 262..291 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..349
Blue background indicates that the domain is not in the aligned region.

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