Protein Alignment CG4328 and inv

DIOPT Version :10

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Alignment Length: 483
• Identity: 84/483 - (17%)
• Similarity: 136/483 - (28%)
• Gaps: 223/483 - (46%)

  Fly     2 IDEHHPMQIGM------------FPMD-------------IKCQQQQLGAGQL--PQTGGLNQLL 39
            :..||.||..:            |.:|             |......:|.|.:  ..||......
  Fly   256 VHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSG 320

  Fly    40 LLNGNERMLTTPTTAATSVVVAAGRSASTKAGVAHNDKMASVSRTVNGSCSNHNSSNSSSSSSTN 104
            ..|||...|..|..:...:.:|...:|:..:        .|.|.::...|||.|.|||:::||:.
  Fly   321 NTNGNRSPLKAPKKSGKPLNLAQSNAAANSS--------LSFSSSLANICSNSNDSNSTATSSST 377

  Fly   105 SSSNMA----INKQPMGMGPGTGTGMGTGTGHGPGP----PNHTHCNRITLGECSLNGMDGFATP 161
            ::::.|    :...|...|.| .||....:|...|.    |...:|.|.
  Fly   378 TNTSGAPVDLVKSPPPAAGAG-ATGASGKSGEDSGTPIVWPAWVYCTRY---------------- 425

  Fly   162 AAPPSASNTPQA-----PLGMASNSGMGMELGLAMASPQLSQCAHCCQPICDRYIMRVVENSFHE 221
            :..||:..:|:|     |...:|.:|.|
  Fly   426 SDRPSSGRSPRARKPKKPATSSSAAGGG------------------------------------- 453

  Fly   222 GCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFA 286
                                                                             
  Fly   454 ----------------------------------------------------------------- 453

  Fly   287 CVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGYDFYGDELFPPKLDGRRGP--KRPRTILN 349
                |..::|||                                   ..||...|  |||||..:
  Fly   454 ----GGGVEKGE-----------------------------------AADGGGVPEDKRPRTAFS 479

  Fly   350 TQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK---------IQKKAK- 404
            ..|....|..|..:.....|.|:.|:.:.||:...:::||||:|||:||         :|..|:
  Fly   480 GTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQG 544

  Fly   405 -----QEPPSKGASDSQDSQESLDSSLA 427
                 ..|.::...:.|:.||:..::.|
  Fly   545 LYNHSTIPLTREEEELQELQEAASAAAA 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	0/51 (0%)
		LIM	259..313	CDD:413332	4/53 (8%)
		COG5576	<332..439	CDD:227863	32/113 (28%)
		HOX	341..393	CDD:197696	18/53 (34%)
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	20/55 (36%)
		Engrail_1_C_sig	529..554	CDD:431338	3/24 (13%)