DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and eve

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster


Alignment Length:129 Identity:33/129 - (25%)
Similarity:49/129 - (37%) Gaps:38/129 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 YGDELFPP------------KLDGRRGPKRP-------------RTILNTQQRRAFKASFEVSPK 365
            ||....||            .|:|.||.:.|             |..|...::..:|.::...|:
  Fly    35 YGKPQTPPPSPNECLSSPDNSLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFYKENYVSRPR 99

  Fly   366 PCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEP-------PSKGASDSQDSQESL 422
            .|     .||....|....::|||||:|.|.|: |:.|...|       |:..||..|.:..|:
  Fly   100 RC-----ELAAQLNLPESTIKVWFQNRRMKDKR-QRIAVAWPYAAVYSDPAFAASILQAAANSV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757
LIM 259..313 CDD:413332
COG5576 <332..439 CDD:227863 31/123 (25%)
HOX 341..393 CDD:197696 14/64 (22%)
eveNP_523670.2 Homeodomain 71..127 CDD:459649 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.

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