Protein Alignment CG4328 and ap

DIOPT Version :9

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_724428.1
• Gene: ap / 35509
• FlyBaseID: FBgn0267978
• Length: 469
• Species: Drosophila melanogaster
• Alignment Length: 474
• Identity: 120/474 - (25%)
• Similarity: 185/474 - (39%)
• Gaps: 124/474 - (26%)

  Fly    64 RSASTKAGVAH--NDKMASVSRTVNGSCSNHNSSNSSSSSSTNSSSNMAINKQPMGMGPGTGTGM 126
            |..|....|||  :::..|.:    |:.:||....:.||||.....:.  :.:|.|...||.:..
  Fly    25 REKSPTPPVAHQGSNQCGSAA----GANNNHPLFRACSSSSCPDICDH--STKPFGNAYGTESFR 83

  Fly   127 GTGTGHGPG----------PPNHTHCNRITLGECSLNGMDGFATPAAPPSASNTPQAPLGMASNS 181
            ...|.....          ..:.|.|..::  :.:.:|:.....|..|||   :|::    .|:|
  Fly    84 SYETADRATFEDSAAKFSISRSRTDCTEVS--DETTSGISFKTEPFGPPS---SPES----TSDS 139

  Fly   182 GMGMELGLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTAC--SLHLVHSCYAREGKL 244
            .:         :..|..|:.|.:.|.||:.:..||..:|..||:|.||  .|....|||:|:|.:
  Fly   140 KI---------TRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNI 195

  Fly   245 YCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFC 309
            ||:.||...:....|..|...|:::|||||....|||:.||.|.||...|.||:||.:....::|
  Fly   196 YCKNDYYSFFGTRRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYC 260

  Fly   310 RFDYEKEVE-------MLQGYDF-------YGDE---------------LF------------PP 333
            |..|....|       |...|.:       :.|.               :|            |.
  Fly   261 RTHYSIAREGDTASSSMSATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPA 325

  Fly   334 KLDGRRGPKRPRTI--------LNTQ--------------------------QRRAFKASFEVSP 364
            :..||...::|:.|        |||:                          |.|..|:.|.::.
  Fly   326 RQKGRPRKRKPKDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINH 390

  Fly   365 KPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSKGASDSQDSQESLDSSLATK 429
            .|..|..:.|::.|||..|::||||||.|||.:::..|    ....|..:..:....|||.
  Fly   391 NPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMK----QDGSGLLEKGEGALDLDSI---- 447

  Fly   430 IKDEAHSDSESQLESPYST 448
               ..||.:...|..|.||
  Fly   448 ---SVHSPTSFILGGPNST 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	22/53 (42%)
		LIM	259..313	CDD:295319	23/53 (43%)
		COG5576	<332..439	CDD:227863	35/140 (25%)
		HOX	341..393	CDD:197696	22/85 (26%)
ap	NP_724428.1	LIM1_Lhx2_Lhx9	148..201	CDD:188755	21/52 (40%)
		LIM2_Lhx2_Lhx9	206..264	CDD:188763	23/57 (40%)
		Homeobox	371..424	CDD:395001	20/52 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	47	0.796	Domainoid score	I4515
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24208
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	3.010