Sequence 1: | NP_648567.2 | Gene: | CG4328 / 39405 | FlyBaseID: | FBgn0036274 | Length: | 544 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_572505.1 | Gene: | Lim1 / 31813 | FlyBaseID: | FBgn0026411 | Length: | 505 | Species: | Drosophila melanogaster |
Alignment Length: | 295 | Identity: | 92/295 - (31%) |
---|---|---|---|
Similarity: | 130/295 - (44%) | Gaps: | 81/295 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 199 CAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLGCG 263
Fly 264 LKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQ-YVVKQGQLFCRFDYEKEVEMLQGYDFYG 327
Fly 328 DELF-----------PPKL---------------------------------------------- 335
Fly 336 ------DGR-------------RGPKR--PRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTG 379
Fly 380 LSLRIVQVWFQNQRAKVKKI-QKKAKQEPPSKGAS 413 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4328 | NP_648567.2 | LIM1_Lmx1b | 199..251 | CDD:188757 | 22/51 (43%) |
LIM | 259..313 | CDD:295319 | 23/54 (43%) | ||
COG5576 | <332..439 | CDD:227863 | 40/150 (27%) | ||
HOX | 341..393 | CDD:197696 | 27/53 (51%) | ||
Lim1 | NP_572505.1 | LIM1_Lhx1_Lhx5 | 27..78 | CDD:188753 | 21/50 (42%) |
LIM2_Lhx1_Lhx5 | 86..141 | CDD:188761 | 23/54 (43%) | ||
COG5576 | 185..324 | CDD:227863 | 37/136 (27%) | ||
Homeobox | 250..303 | CDD:278475 | 27/52 (52%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 48 | 1.000 | Domainoid score | I4481 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |