DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and isl2b

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571039.1 Gene:isl2b / 30151 ZFINID:ZDB-GENE-990415-133 Length:358 Species:Danio rerio


Alignment Length:254 Identity:84/254 - (33%)
Similarity:129/254 - (50%) Gaps:44/254 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GLAMASPQLSQCAHCCQPICDRYIMRVVEN-SFHEGCLKCTACSLHL--VHSCYAREGKLYCRVD 249
            ||||       |..|...|.|:||:||..: .:|..||||..|:.:|  ..:|:.|:||.||:.|
Zfish    23 GLAM-------CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRD 80

  Fly   250 YERLY-IRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDY 313
            |.||: |:  |..|.|..::.:||||..::|:|::||.|.||...|..|:::.|:..:|.||.|:
Zfish    81 YVRLFGIK--CAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADH 143

  Fly   314 EKEVEMLQGYDFYGDELFPPKLDGR------------------------RGPKRPRTILNTQQRR 354
            ...:|...|    |..|.|..:..|                        ....|.||:||.:|..
Zfish   144 GLALERGPG----GSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQLH 204

  Fly   355 AFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK---IQKKAKQEPPSK 410
            ..:..:..:|:|...::|.|.:.||||.|:::|||||:|.|.||   :.|:.:|:...|
Zfish   205 TLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSILMKQLQQQHGDK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 22/54 (41%)
LIM 259..313 CDD:413332 20/53 (38%)
COG5576 <332..439 CDD:227863 29/106 (27%)
HOX 341..393 CDD:197696 20/51 (39%)
isl2bNP_571039.1 LIM1_Isl 27..81 CDD:188752 21/53 (40%)
LIM2_Isl2 89..143 CDD:188855 20/53 (38%)
HOX 191..247 CDD:197696 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358
Blue background indicates that the domain is not in the aligned region.

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