DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and phx1

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_593776.1 Gene:phx1 / 2542405 PomBaseID:SPAC32A11.03C Length:942 Species:Schizosaccharomyces pombe


Alignment Length:194 Identity:50/194 - (25%)
Similarity:79/194 - (40%) Gaps:26/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 PKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQ 405
            ||..:..|...|.......|.....|...:||.:.::..:..|.|.:||||:|||.|.|.:  :|
pombe   166 PKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKLISR--RQ 228

  Fly   406 EPPSKGASDSQDSQESLDSSLATKIKDEAHSDSESQLESPYSTTSDGLTRMR---------CTIK 461
            |...:.....|...:||:..::.....|..|.|.:   |||   ..|:...|         .|.|
pombe   229 EEERQRILREQRELDSLNQKVSQAFAHEVLSTSPT---SPY---VGGIAANRQYANTLLPKPTRK 287

  Fly   462 DEQEQVPFNCMETNKENCNKNSE-PILNTILGLSYATFQQLMGPFAQTPMINPIDRLYSMQSSY 524
            .....:....|:::.|.|...|: ||..::    .:|:...:.|.| .|:.:  .|.|| .|||
pombe   288 TGNFYMKSGPMQSSMEPCIAESDIPIRQSL----SSTYYNSLSPNA-VPVSS--QRKYS-ASSY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757
LIM 259..313 CDD:413332
COG5576 <332..439 CDD:227863 26/97 (27%)
HOX 341..393 CDD:197696 14/51 (27%)
phx1NP_593776.1 COG5576 116..272 CDD:227863 31/113 (27%)
Blue background indicates that the domain is not in the aligned region.

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