Protein Alignment CG4328 and Lim3

DIOPT Version :10

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: XP_061512478.1
• Gene: Lim3 / 1280042
• VectorBaseID: AGAMI1_009711
• Length: 558
• Species: Anopheles gambiae
• Alignment Length: 466
• Identity: 135/466 - (28%)
• Similarity: 213/466 - (45%)
• Gaps: 124/466 - (26%)

  Fly    43 GNERMLTTPTTAATSVVVAAGRSASTKAGVAHNDKMASVSRTVNGSCS----------------- 90
            |.:.|..:..|..:|:::....|:|: .|..|:..::  ....||..|
Mosquito    13 GIDAMSLSQMTLPSSMMLPLAHSSSS-LGSGHSSLLS--HSMANGQTSLGTIGSLDGGGLSIGST 74

  Fly    91 ---NHNSSNSSSSSSTNSSSNMAINKQPMGMGPGTGTGMGTGTGHGPGPPNHTHCNRITLGECSL 152
               ..||::|||::|::||||                    ..|||            :|...||
Mosquito    75 RSLQLNSASSSSNNSSSSSSN--------------------SNGHG------------SLSGGSL 107

  Fly   153 NGMDGFATPAAPPSASNTPQAPLGMASNSGMGM------------ELGLAMAS------PQLSQC 199
            .|:     ||..           |.:|..|.|:            |:.||:.|      ..:.:|
Mosquito   108 TGL-----PALH-----------GQSSTIGAGLSGELLGDHHPNPEMLLALISRNKALEATIPKC 156

  Fly   200 AHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLGCGL 264
            ..|.:.|.||:|::|.:.::|..||:|:.|.:.|...|:||.|:|:|:.|:.:.| ...|..|.|
Mosquito   157 GGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFFKRY-GTKCAACDL 220

  Fly   265 KIAADELVMRCHENVFHLKCFACVVCGALLKKGEQ-YVVKQGQLFCRFDYE----KEVEMLQGYD 324
            .|...::|.|..:||:||:||.|.:|...|..|:: |:::..:|.|:.|||    |.:.:..|
Mosquito   221 GIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLMEDCKLICKPDYEAAKAKGLYLSDG-- 283

  Fly   325 FYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWF 389
                     .|||....|||||.:..:|....|:::..||||.|.|||.|::||||.:|:|||||
Mosquito   284 ---------SLDGESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWF 339

  Fly   390 QNQRAKVKKIQKKAKQEPPS------KGAS---------DSQDSQESLDSSLATKIKDEAHSDSE 439
            ||:|||.|:::|.|.:...|      ||.|         |..:.:..|||.....:.::::|.|.
Mosquito   340 QNRRAKEKRLKKDAGRTRWSQYFRSMKGTSSPNRVDKLLDKDELKIDLDSFSHHDLSNDSYSTSN 404

  Fly   440 SQLE---SPYS 447
            ..||   ||:|
Mosquito   405 MGLEDGASPHS 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	20/51 (39%)
		LIM	259..313	CDD:413332	19/54 (35%)
		COG5576	<332..439	CDD:227863	46/121 (38%)
		HOX	341..393	CDD:197696	28/51 (55%)
Lim3	XP_061512478.1	None