Sequence 1: | NP_648567.2 | Gene: | CG4328 / 39405 | FlyBaseID: | FBgn0036274 | Length: | 544 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937918.1 | Gene: | lmx1b.1 / 100495130 | XenbaseID: | XB-GENE-494750 | Length: | 400 | Species: | Xenopus tropicalis |
Alignment Length: | 401 | Identity: | 162/401 - (40%) |
---|---|---|---|
Similarity: | 213/401 - (53%) | Gaps: | 102/401 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 MGMELGLAMASPQLSQCAH------CCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYARE 241
Fly 242 GKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQ 306
Fly 307 LFCRFDYEKEVEML-----------QGYDFYGDELFPPKL---------DGR--RGPKRPRTILN 349
Fly 350 TQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSKGASD 414
Fly 415 SQDSQESLDSSLATKIKDEAHSDSESQLESP-----------YSTT--SDGLTRMRCTIKDEQEQ 466
Fly 467 VPFNCME-----------------TNKENCNKNSEPILNTILGLSYATFQQLMGPFAQTPMINPI 514
Fly 515 DRLYSMQSSYF 525 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4328 | NP_648567.2 | LIM1_Lmx1b | 199..251 | CDD:188757 | 28/57 (49%) |
LIM | 259..313 | CDD:295319 | 28/53 (53%) | ||
COG5576 | <332..439 | CDD:227863 | 60/117 (51%) | ||
HOX | 341..393 | CDD:197696 | 44/51 (86%) | ||
lmx1b.1 | XP_002937918.1 | LIM1_Lmx1b | 56..108 | CDD:188757 | 26/51 (51%) |
LIM2_Lmx1a_Lmx1b | 115..169 | CDD:188764 | 28/53 (53%) | ||
Homeobox | 221..275 | CDD:365835 | 45/53 (85%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6758 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 245 | 1.000 | Inparanoid score | I3208 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D323174at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001820 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3844 |
SonicParanoid | 1 | 1.000 | - | - | X1182 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.100 |