Protein Alignment CG4328 and lmx1a

DIOPT Version :9

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: XP_002934210.1
• Gene: lmx1a / 100492433
• XenbaseID: XB-GENE-481569
• Length: 380
• Species: Xenopus tropicalis
• Alignment Length: 410
• Identity: 152/410 - (37%)
• Similarity: 215/410 - (52%)
• Gaps: 97/410 - (23%)

  Fly   169 NTPQAPLGMASNSGMGMELGLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHL 233
            |..:....::|..|.|||        |...|..|.:.||||:::|:.::.:||.|.:|..|...|
 Frog    13 NVIETSAALSSLFGRGME--------QKWVCEGCERVICDRFLLRISDSLWHEQCAQCCTCKEPL 69

  Fly   234 VHSCYAREGKLYCRVDYERLYIRNHCLGCGL---KIAADELVMRCHENVFHLKCFACVVCGALLK 295
            ..||:.|:.|||||.|||:|:    .:.||.   .|...|.|||..:||:||.||.|.||...|:
 Frog    70 ESSCFYRDKKLYCRNDYEKLF----AVKCGTCLDTITPSEFVMRAQKNVYHLGCFCCCVCDRQLQ 130

  Fly   296 KGEQYVVKQGQLFCRFDYEKEVEML-------------QGYDFYG--DELFPPKLDGR--RGPKR 343
            ||:::|:|.|||.|:.|||:|.::|             :..|..|  |:...|: ||:  :.|||
 Frog   131 KGDEFVLKDGQLLCKSDYERERDLLSLVSPAASDSGKSEDEDDAGKFDDSKGPE-DGKDQKRPKR 194

  Fly   344 PRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPP 408
            |||||.||||||||||||||.||||||||.||.:||||:|:|||||||||||:||:.::.:|:
 Frog   195 PRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQ-- 257

  Fly   409 SKGASDSQDSQESLDSSLATKIKD-EAHSDSESQLESPYSTTSDGLTRMRCTIKDEQ-------- 464
                      |:..|....::|.. :.|:.|.|.:|        |:..:..|:..:|
 Frog   258 ----------QQQQDQQNPSRIPSAQTHNSSSSSVE--------GIMNVFTTLPQQQLLSLEQNI 304

  Fly   465 ------------EQVP------------FNCMETNKENCNKNSEPILNTILGLSYATFQQLMGPF 505
                        .|:|            |:.::::..:.|..||.:|.   |....:.|..:|
 Frog   305 YSADPFQQGLTPPQMPGDHMHPYGGESLFHDIDSDDASLNNLSECLLP---GPELGSIQGRVG-- 364

  Fly   506 AQTPMINPIDRLYSMQSSYF 525
                  ||||||||||:|||
 Frog   365 ------NPIDRLYSMQNSYF 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	22/51 (43%)
		LIM	259..313	CDD:295319	25/56 (45%)
		COG5576	<332..439	CDD:227863	58/109 (53%)
		HOX	341..393	CDD:197696	44/51 (86%)
lmx1a	XP_002934210.1	LIM1_Lmx1a	35..86	CDD:188756	21/50 (42%)
		LIM	94..148	CDD:351770	25/53 (47%)
		Homeobox	195..249	CDD:365835	45/53 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	102	1.000	Domainoid score	I6758
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	245	1.000	Inparanoid score	I3208
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D323174at33208
OrthoFinder	1	1.000	-	-		FOG0001820
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24208
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3844
SonicParanoid	1	1.000	-	-		X1182
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	10	10.100