DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and zfhx4

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_012820690.1 Gene:zfhx4 / 100486096 XenbaseID:XB-GENE-957673 Length:3559 Species:Xenopus tropicalis


Alignment Length:222 Identity:50/222 - (22%)
Similarity:79/222 - (35%) Gaps:73/222 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKA--- 403
            ||.||.:..:|.......:.:...|.||:.:::|::.||..|:|||||||.||:.:|.|.:|   
 Frog  2554 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERKGQFRALGP 2618

  Fly   404 --------------------------------KQE----PPS-----KGASDSQDSQESLDSSLA 427
                                            ||.    |||     :...:|.:.....|....
 Frog  2619 AQSHKRCPFCRALFKAKSALESHIRSRHWNEGKQAGYSLPPSPLISMEDGGESPNKYTYFDYVSI 2683

  Fly   428 TKIKDEAHSDSESQLESPYSTTSDGLTRMRCTIKDEQEQVPFNCMETN--KENC-----NKNSEP 485
            .|:...:.:|..|.:.:|.|.|:              |..|.|.:..:  :..|     |.|:.|
 Frog  2684 PKLDPSSENDLPSTVSTPVSKTA--------------ELSPKNLLSPSSFRAECSDDIDNINAPP 2734

  Fly   486 ILNTILGLSYATFQQLMGPFAQTPMIN 512
                    :...|.|....|.:|..||
 Frog  2735 --------ADTGFDQSKNDFDETSSIN 2753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757
LIM 259..313 CDD:413332
COG5576 <332..439 CDD:227863 33/140 (24%)
HOX 341..393 CDD:197696 19/50 (38%)
zfhx4XP_012820690.1 C2H2 Zn finger 641..661 CDD:275368
C2H2 Zn finger 696..713 CDD:275368
C2H2 Zn finger 1372..1392 CDD:275371
C2H2 Zn finger 1400..1421 CDD:275371
C2H2 Zn finger 1516..1540 CDD:275368
C2H2 Zn finger 1568..1586 CDD:275368
HOX 2091..2146 CDD:197696
Homeodomain 2188..2244 CDD:459649
Atrophin-1 2298..>2498 CDD:460830
COG5576 2527..2647 CDD:227863 24/92 (26%)
Homeodomain 2554..2610 CDD:459649 21/55 (38%)
Homeodomain 2877..2933 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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