DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sms and SPE3

DIOPT Version :9

Sequence 1:NP_001287045.1 Gene:Sms / 39403 FlyBaseID:FBgn0036272 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_015394.1 Gene:SPE3 / 856182 SGDID:S000006273 Length:293 Species:Saccharomyces cerevisiae


Alignment Length:194 Identity:48/194 - (24%)
Similarity:94/194 - (48%) Gaps:20/194 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PPIKRGGYIDIYMTSSDERIIEYDIDKVVFEARSPFQKIQIMHSKTLGNMLLLDELQNIAESD-L 180
            |.|..|.:.:|..|....:.:...::||:...:|.:|.:.|..|.|.||:|:||.:....|.| .
Yeast     8 PTIVDGWFREISDTMWPGQAMTLKVEKVLHHEKSKYQDVLIFKSTTYGNVLVLDNVIQATERDEF 72

  Fly   181 IYTETLMCRGVENYEG-KEICILGGGDGALLYELLK-ENPKHVVMLEIDELVMQTCNKYLNVICG 243
            .|.|.:....:.::.. |::.::|||||.:|.|::| ::.:...:.:|||.|::...:||    .
Yeast    73 AYQEMIAHLALNSHPNPKKVLVIGGGDGGVLREVVKHDSVEEAWLCDIDEAVIRLSKEYL----P 133

  Fly   244 DVLEKRKGDQYEIIVGDCVEYLKKFIAEGRKFDYVFGDLTDIPITDAPEGETWDFIRTIFEHSF 307
            ::.......:.:..:||..::|:.:   ...||.:..|.:|      |||..    .|:|:..:
Yeast   134 EMAASYSHPKVKTHIGDGFQFLRDY---QNTFDVIITDSSD------PEGPA----ETLFQKEY 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmsNP_001287045.1 AdoMet_MTases 137..362 CDD:302624 43/174 (25%)
SPE3NP_015394.1 speE 14..287 CDD:188048 45/188 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0421
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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