DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sms and srsf7

DIOPT Version :9

Sequence 1:NP_001287045.1 Gene:Sms / 39403 FlyBaseID:FBgn0036272 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001007487.1 Gene:srsf7 / 493215 XenbaseID:XB-GENE-920026 Length:234 Species:Xenopus tropicalis


Alignment Length:67 Identity:17/67 - (25%)
Similarity:25/67 - (37%) Gaps:24/67 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 RKFDYVFGDLTDIPITDAPEG----------ETWDFIRTIFEHSFKVLKPDGKYLTHGNGSTCKV 327
            |.|.| :|.|..:.|...|.|          :..|.:|.:          |||.:.   ||..:|
 Frog    29 RAFSY-YGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGL----------DGKVIC---GSRVRV 79

  Fly   328 QL 329
            :|
 Frog    80 EL 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmsNP_001287045.1 AdoMet_MTases 137..362 CDD:302624 17/67 (25%)
srsf7NP_001007487.1 RRM_SF 12..88 CDD:327398 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165177804
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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