DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbgs and hemB

DIOPT Version :10

Sequence 1:NP_648564.1 Gene:Pbgs / 39402 FlyBaseID:FBgn0036271 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_414903.4 Gene:hemB / 945017 ECOCYCID:EG10428 Length:324 Species:Escherichia coli


Alignment Length:302 Identity:123/302 - (40%)
Similarity:185/302 - (61%) Gaps:13/302 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HNLMYPVFIVSNDDDVQPIASMPGISRFGLNRLKEHLEPLVAKGLSSVLLFGVVDPDMKDEQASN 91
            ::|:.|:|:....||.:.:.:|||:.|.....|...:|.:...|:.||:.||:  ....||..|:
E. coli    29 NDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGI--SHHTDETGSD 91

  Fly    92 ADSAKNPVVLALPKL-REWFPDLLIACDVCICPYSSHGHCGLLGETGLENGPSIKRIAEIAVAYA 155
            | ..::.:|..:.:: ::..|::::..|.|.|.|:||||||:|.|.|::|..:::.:.:.||..|
E. coli    92 A-WREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAA 155

  Fly   156 KAGAHIVAPSDMMDNRVKAIKQALIDAQMNSVSLLAYSAKFTSNFYGPFREAAQSAPKFGDRRCY 220
            .|||..:|||..||.:|:||:|||..|.....::::||.||.|:|||||||||.||.| |||:.|
E. coli   156 AAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALK-GDRKSY 219

  Fly   221 QLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTKD--SYPYHTLYVYQVSGEFAMLYH 283
            |:...:|..|:|....|.|:|||.|||||...||||:|..::  ..|   :..||||||:||:..
E. coli   220 QMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELP---IGAYQVSGEYAMIKF 281

  Fly   284 AAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLLDIIGK 325
            ||.|||.|.:..|||::...:|||||.|.:|   |.||:..|
E. coli   282 AALAGAIDEEKVVLESLGSIKRAGADLIFSY---FALDLAEK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PbgsNP_648564.1 eu_ALAD_PBGS_cysteine_rich 6..323 CDD:240128 122/298 (41%)
hemBNP_414903.4 PRK09283 1..319 CDD:236450 122/299 (41%)

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