DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbgs and HEM2

DIOPT Version :9

Sequence 1:NP_001261752.1 Gene:Pbgs / 39402 FlyBaseID:FBgn0036271 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_011475.1 Gene:HEM2 / 852842 SGDID:S000003008 Length:342 Species:Saccharomyces cerevisiae


Alignment Length:320 Identity:163/320 - (50%)
Similarity:218/320 - (68%) Gaps:4/320 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LHSGMHHATLRQLQESGCEIAPHNLMYPVFIVSNDDDVQPIASMPGISRFGLNRLKEHLEPLVAK 69
            |..|.:|..|||.| |..::..:.|::|:||..|.||...|.|:|.|:|.|:||||::|:|||||
Yeast    18 LAGGYNHPLLRQWQ-SERQLTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAK 81

  Fly    70 GLSSVLLFGV-VDPDMKDEQASNADSAKNPVVLALPKLREWFPDLLIACDVCICPYSSHGHCGLL 133
            ||.||:|||| :.|..||...:.||....||:..:..:||:||:|.|.||||:|.|:||||||:|
Yeast    82 GLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVL 146

  Fly   134 GETGLENGP-SIKRIAEIAVAYAKAGAHIVAPSDMMDNRVKAIKQALIDAQM-NSVSLLAYSAKF 196
            .:.|..|.. |:.|:|.:||.|||||||.||||||:|.|::.||:.||:|.: :...:|:|:|||
Yeast   147 YDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKF 211

  Fly   197 TSNFYGPFREAAQSAPKFGDRRCYQLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTK 261
            :.|.|||||:||.|||..|||:|||||...|.||.||::||::||||.::|||...||||:|...
Yeast   212 SGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDAS 276

  Fly   262 DSYPYHTLYVYQVSGEFAMLYHAAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLLD 321
            :......:..|.||||:|||:.||:.|..|||....|:.:||.||||..||||..|..||
Yeast   277 EICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLD 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PbgsNP_001261752.1 eu_ALAD_PBGS_cysteine_rich 6..323 CDD:240128 162/319 (51%)
HEM2NP_011475.1 eu_ALAD_PBGS_cysteine_rich 20..338 CDD:240128 162/318 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343262
Domainoid 1 1.000 303 1.000 Domainoid score I214
eggNOG 1 0.900 - - E1_COG0113
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16
Inparanoid 1 1.050 309 1.000 Inparanoid score I476
Isobase 1 0.950 - 0 Normalized mean entropy S746
OMA 1 1.010 - - QHG61014
OrthoFinder 1 1.000 - - FOG0004339
OrthoInspector 1 1.000 - - oto98993
orthoMCL 1 0.900 - - OOG6_101254
Panther 1 1.100 - - LDO PTHR11458
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R555
SonicParanoid 1 1.000 - - X3061
TreeFam 1 0.960 - -
1615.740

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