DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbgs and HEMB1

DIOPT Version :10

Sequence 1:NP_648564.1 Gene:Pbgs / 39402 FlyBaseID:FBgn0036271 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_177132.1 Gene:HEMB1 / 843310 AraportID:AT1G69740 Length:430 Species:Arabidopsis thaliana


Alignment Length:310 Identity:128/310 - (41%)
Similarity:194/310 - (62%) Gaps:16/310 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TLRQLQESGCEIAPHNLMYPVFIVSNDDDVQPIASMPGISRFGLNR-LKEHLEPLVAKGLSSVLL 76
            |....||:  :|:|.|.:||:||...::|. ||.:|||..|.|... |.:.:....|.|::|::|
plant   117 TRAAFQET--DISPANFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARAVGVNSIVL 178

  Fly    77 FGVVDPDMKDEQASNADSAKNPVVLALPKLREWFPDLLIACDVCICPYSSHGHCGLLGETG-LEN 140
            |..|...:|:.....|.:....|...:..|::.:|||:|..||.:.||||.||.|::.|.| :.|
plant   179 FPKVPEALKNSTGDEAYNDNGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMN 243

  Fly   141 GPSIKRIAEIAVAYAKAGAHIVAPSDMMDNRVKAIKQALIDAQMNSVSLLAYSAKFTSNFYGPFR 205
            ..::.::.:.||:.|:|||.:|:||||||.||.||:.||......:||:::|:||:.|:||||||
plant   244 DETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRSALDAEGFQNVSIMSYTAKYASSFYGPFR 308

  Fly   206 EAAQSAPKFGDRRCYQL-PSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTKDSYPYHTL 269
            ||..|.|:|||::.||: |:..|...:.| :.|.|||||:|:||||:|||||:|..:|..|. .:
plant   309 EALDSNPRFGDKKTYQMNPANYREALIEA-REDEAEGADILLVKPGLPYLDIIRLLRDKSPL-PI 371

  Fly   270 YVYQVSGEFAMLYHAAKAGA----FDLKDAVLEAMKGFRRAGADCIITYY 315
            ..||||||::|:    |||.    .|.:..::|::...||||||.|:||:
plant   372 AAYQVSGEYSMI----KAGGVLKMIDEEKVMMESLMCLRRAGADIILTYF 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PbgsNP_648564.1 eu_ALAD_PBGS_cysteine_rich 6..323 CDD:240128 128/310 (41%)
HEMB1NP_177132.1 ALAD_PBGS_aspartate_rich 106..426 CDD:240127 128/310 (41%)

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