DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbgs and hem2

DIOPT Version :9

Sequence 1:NP_001261752.1 Gene:Pbgs / 39402 FlyBaseID:FBgn0036271 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_593917.1 Gene:hem2 / 2542373 PomBaseID:SPAC1805.06c Length:329 Species:Schizosaccharomyces pombe


Alignment Length:323 Identity:176/323 - (54%)
Similarity:225/323 - (69%) Gaps:12/323 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LHSGMHHATLRQLQESGCE-IAPHNLMYPVFIVSNDDDVQPIASMPGISRFGLNRLKEHLEPLVA 68
            ||:|..:..||:.|  |.. |...:||||:||...||..:.|.|||...|:|:|||:|.|.|||.
pombe     9 LHAGYSNPLLREWQ--GVRPITKSSLMYPIFISEIDDAKEAIDSMPNQFRWGVNRLEEFLGPLVK 71

  Fly    69 KGLSSVLLFGVVDPDMKDEQASNADSAKNPVVLALPKLREWFPDLLIACDVCICPYSSHGHCGLL 133
            |||.||:||||:: ..||...|.|||...||:.|:.::|..||:|::|||||:|.|:.|||||||
pombe    72 KGLRSVILFGVIE-SKKDYCGSMADSENGPVIKAVKEIRHLFPELVVACDVCLCEYTDHGHCGLL 135

  Fly   134 GETG-LENGPSIKRIAEIAVAYAKAGAHIVAPSDMMDNRVKAIKQALIDAQM-NSVSLLAYSAKF 196
            .|.| :.|..|::||||::..||.|||.|::|||.||.|||||||.|::.:: :.|.:::|||||
pombe   136 YEDGTINNAKSVERIAEVSGNYALAGAQIISPSDCMDGRVKAIKQKLVELELSHKVCVISYSAKF 200

  Fly   197 TSNFYGPFREAAQSAPKFGDRRCYQLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTK 261
            .|.|:||||.||..|||||||.|||||..:|.||.|||.|||.||||.:|||||.||||||....
pombe   201 ASGFFGPFRAAANGAPKFGDRSCYQLPCNARGLAKRAILRDVREGADGIMVKPGTPYLDILAMAS 265

  Fly   262 ---DSYPYHTLYVYQVSGEFAMLYHAAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLLD 321
               |..|..|   ||||||||:::.||.||.|:||..|:|.|.||.||||:.::||:||.||:
pombe   266 KLADDLPIAT---YQVSGEFAIIHAAAAAGVFELKRHVMETMDGFMRAGANIVLTYFTPELLE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PbgsNP_001261752.1 eu_ALAD_PBGS_cysteine_rich 6..323 CDD:240128 175/322 (54%)
hem2NP_593917.1 eu_ALAD_PBGS_cysteine_rich 10..327 CDD:240128 175/322 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 319 1.000 Domainoid score I231
eggNOG 1 0.900 - - E1_COG0113
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16
Inparanoid 1 1.050 326 1.000 Inparanoid score I537
OMA 1 1.010 - - QHG61014
OrthoFinder 1 1.000 - - FOG0004339
OrthoInspector 1 1.000 - - oto100478
orthoMCL 1 0.900 - - OOG6_101254
Panther 1 1.100 - - LDO PTHR11458
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R555
SonicParanoid 1 1.000 - - X3061
TreeFam 1 0.960 - -
1413.860

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