DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbgs and Alad

DIOPT Version :10

Sequence 1:NP_648564.1 Gene:Pbgs / 39402 FlyBaseID:FBgn0036271 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_037031.1 Gene:Alad / 25374 RGDID:2083 Length:330 Species:Rattus norvegicus


Alignment Length:320 Identity:195/320 - (60%)
Similarity:243/320 - (75%) Gaps:6/320 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LHSGMHHATLRQLQESGCEIAPHNLMYPVFIVSNDDDVQPIASMPGISRFGLNRLKEHLEPLVAK 69
            ||||..|..||..|.:...::..||:||:|:....||||||||:||::|:|:|:|:|.|.|||..
  Rat     7 LHSGYFHPLLRAWQTTPSTVSATNLIYPIFVTDVPDDVQPIASLPGVARYGVNQLEEMLRPLVEA 71

  Fly    70 GLSSVLLFGVVDPDMKDEQASNADSAKNPVVLALPKLREWFPDLLIACDVCICPYSSHGHCGLLG 134
            ||..||:|||.....||||.|.|||..:|.:.|:..||:.||.||:|||||:|||:||||||||.
  Rat    72 GLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPTLLVACDVCLCPYTSHGHCGLLS 136

  Fly   135 ETG---LENGPSIKRIAEIAVAYAKAGAHIVAPSDMMDNRVKAIKQALIDAQM-NSVSLLAYSAK 195
            |.|   .|.  |.:|:||:|:||||||..:||||||||.||:|||.||:...: |.||:::||||
  Rat   137 ENGAFLAEE--SRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKAALLKHGLGNRVSVMSYSAK 199

  Fly   196 FTSNFYGPFREAAQSAPKFGDRRCYQLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRST 260
            |.|.||||||:||||:|.||||||||||.|:|.||:||:.||:.||||:||||||:||||:::..
  Rat   200 FASCFYGPFRDAAQSSPAFGDRRCYQLPPGARGLALRAVARDIQEGADILMVKPGLPYLDMVQEV 264

  Fly   261 KDSYPYHTLYVYQVSGEFAMLYHAAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLL 320
            ||.:|...|.|||||||||||:|.||||||||:.||||:|..|||||||.||||:.|.||
  Rat   265 KDKHPELPLAVYQVSGEFAMLWHGAKAGAFDLRTAVLESMTAFRRAGADIIITYFAPQLL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PbgsNP_648564.1 eu_ALAD_PBGS_cysteine_rich 6..323 CDD:240128 194/319 (61%)
AladNP_037031.1 eu_ALAD_PBGS_cysteine_rich 8..327 CDD:240128 194/319 (61%)

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