DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and PFA3

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_014073.1 Gene:PFA3 / 855390 SGDID:S000005270 Length:336 Species:Saccharomyces cerevisiae


Alignment Length:262 Identity:74/262 - (28%)
Similarity:103/262 - (39%) Gaps:65/262 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TCILI-TGTSALFFAFDCP--FLADSINPAIPIVGAVLYFFTMSSLLRTTFTDPGVIPRASNDEA 110
            ||:.| |....|......|  |||.:|   :|.:...||.:     .:.....|| .|....|..
Yeast    17 TCLYIWTAYITLTRIHQIPRWFLALTI---VPTLAVALYTY-----YKVIARGPG-SPLDFPDLL 72

  Fly   111 AYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDH 175
            .:..|..|  |.|..|   |...:|..|......:.:.|..|.:::|.|..|||.||.|:.:.||
Yeast    73 VHDLKAAE--NGLELP---PEYMSKRCLTLKHDGRFRVCQVCHVWKPDRCHHCSSCDVCILKMDH 132

  Fly   176 HCPWVGNCVGKRNYRFFYLFLV---SLAFLAVFIFSCSVTHLVLLMKKEHEV--------FN--- 226
            ||||...|.|.||.:||..||:   ..||| |.|::|            :|:        ||   
Yeast   133 HCPWFAECTGFRNQKFFIQFLMYTTLYAFL-VLIYTC------------YELGTWFNSGSFNREL 184

  Fly   227 ---------VIKAAPFTVIVVFICFFSIWSV------IGLAGFHTY-----LTTSDQTTNEDLKG 271
                     ::..|.|..::.|.| |||:.|      |.:.|...|     :......|||.|:.
Yeast   185 IDFHLLGVALLAVAVFISVLAFTC-FSIYQVCKNQTTIEVHGMRRYRRDLEILNDSYGTNEHLEN 248

  Fly   272 SF 273
            .|
Yeast   249 IF 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 47/157 (30%)
PFA3NP_014073.1 COG5273 1..304 CDD:227598 74/262 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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