DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and AT5G41060

DIOPT Version :10

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_198922.1 Gene:AT5G41060 / 834108 AraportID:AT5G41060 Length:410 Species:Arabidopsis thaliana


Alignment Length:405 Identity:127/405 - (31%)
Similarity:192/405 - (47%) Gaps:70/405 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RVTRKWELFAGRNKFYCDGLLMSAPHTGVFYLTCILITGTSALFFAFDCPFLA--------DSIN 73
            ||.:.|:   |.|.|...|..:..|......||..||.....:|    |.|:|        ||..
plant    19 RVYQTWK---GSNIFCLQGRFIFGPDVRSLGLTISLIVAPVTIF----CIFVASKLMDDFSDSWG 76

  Fly    74 PAIPIVGAVLYFFTMSSLLRTTFTDPGVIPRASNDEAAYIEKQIEVPNSLNSPTYRPP--PRTKE 136
            .:|.:|..|...:.:..|:.|:..|||:|||.|:..    |.:: |..:..|.|.:.|  ||.||
plant    77 VSIILVAVVFTIYDLILLMLTSGRDPGIIPRNSHPP----EPEV-VDGNTGSGTSQTPRLPRVKE 136

  Fly   137 VLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAF 201
            |.|.|:..|:|||.||.::||||.||||:|:|||:||||||||||.|:.:||||||::|:.|...
plant   137 VEVNGKVFKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIAQRNYRFFFMFVFSTTL 201

  Fly   202 LAVFIFSCSVTHLVLLMKKEHEVFNVIKA---APFTVIVVFICFFSIWSVIGLAGFHTYLTTSDQ 263
            |.|::|:....::..:  ||.|..:::||   .|.::.::...|.|.:.|.||..||.||.:::|
plant   202 LCVYVFAFCCVYIKKI--KESEDISILKAMLKTPASIALILYTFISTFFVGGLTCFHLYLISTNQ 264

  Fly   264 TTNEDLKGSFSSKGGPRTQNPYSRGNICLNCCHILCGPMTPSLIDRRGIATDEFIQQMQHQSSPR 328
            ||.|:.:.|:.     |..||:::| :..|...|...|:.||..:.|.:...|         :| 
plant   265 TTYENFRYSYD-----RHSNPHNKG-VVDNFKEIFFSPIPPSKNNFRAMVPRE---------NP- 313

  Fly   329 HALSDVLSASHMVTTSQPMMGGLGGGGIGGAGGGISIG--------------GAELKPRFYDESN 379
                         ..|:.::||.....:|.|...|.:|              ......||:...|
plant   314 -------------MPSRSVVGGFMSPNMGKANDDIEMGRKGVWAMAEHGDGKDGNNNERFHVNDN 365

  Fly   380 PSSSTLEGNGGAING 394
            ..:......|..:||
plant   366 ELNELSPDMGNIVNG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 DHHC 146..270 CDD:396215 58/126 (46%)
AT5G41060NP_198922.1 DHHC 147..273 CDD:396215 58/127 (46%)

Return to query results.
Submit another query.