DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and zdhhc3b

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001071225.1 Gene:zdhhc3b / 777709 ZFINID:ZDB-GENE-061110-19 Length:300 Species:Danio rerio


Alignment Length:236 Identity:68/236 - (28%)
Similarity:109/236 - (46%) Gaps:40/236 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LTCILITGTSALFFAFDCPFLADSINPAIPIV-----GAV---LYFFTMSSLLRTTFTDPGVIPR 104
            :.|.:||....|:..|...|:  .:.||..::     ||:   |.|..::|.||...||||.:|:
Zfish    46 IVCAVITWLLVLYAEFVVVFV--MLLPARSLLYSFINGALFNSLAFLALASHLRAMCTDPGAVPK 108

  Fly   105 ASNDEAAYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKY-CFTCKIFRPPRASHCSLCDN 168
             .|....:||       ||.             |..||.|   | |..|...:|.||.|||:|..
Zfish   109 -GNATKEFIE-------SLQ-------------LKPGQVV---YKCPKCCSIKPDRAHHCSVCKR 149

  Fly   169 CVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLLMKKEHEVFNVIKAAPF 233
            |:.:.|||||||.||||:.|.::|.||.:.:|.:::........|.|...:::....:.......
Zfish   150 CIKKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALLMVAFHFVFCFEEDWAKCSSFSPPAT 214

  Fly   234 TVIVVFICF----FSIWSVIGLAGFHTYLTTSDQTTNEDLK 270
            .::::.:||    |.|::.: :.|...:...:|:|..|.||
Zfish   215 VILLILLCFEALLFLIFTAV-MFGTQVHSICNDETGIEQLK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 37/128 (29%)
zdhhc3bNP_001071225.1 zf-DHHC 130..256 CDD:279823 38/126 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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