DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc1

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_691086.3 Gene:zdhhc1 / 562614 ZFINID:ZDB-GENE-130925-1 Length:578 Species:Danio rerio


Alignment Length:663 Identity:146/663 - (22%)
Similarity:222/663 - (33%) Gaps:231/663 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AVLYFFTMSSLLRTTFTDPGVI--------------PRASNDEAAYIEKQIEVPNSLNSPTYRPP 131
            ||..|.....||.|.:...|.|              ...|.|.|.|         ::.:.:|:.|
Zfish    52 AVTGFGVFVPLLPTHWIPAGYICTGITFVCHLFMHLMAVSIDPADY---------NVRAKSYKGP 107

  Fly   132 ----PRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFF 192
                .|||...|    ::..:|:.|::...|::.|||.|:.||..|||||.|:.||||.|||   
Zfish   108 MPVFDRTKHAHV----IENCHCYLCEVDVGPKSKHCSACNKCVASFDHHCRWLNNCVGSRNY--- 165

  Fly   193 YLFLVSL--AFLAVFIFSCSVTHLVLLMKKEHEVFNVIKAAPFTVIVVFICFF------------ 243
            :|||.|:  |.|.:.:                    |:..|.:    |||.||            
Zfish   166 WLFLNSVISALLGIVL--------------------VVVIASY----VFIEFFLDPSKLRSDKHF 206

  Fly   244 -------SIWSVIGLAGFHTYLTTSDQTTNEDLKGSFSSKGGPRTQNPYSRG-NICLNCC----- 295
                   .:|.|        :|..:..||           .||..  |...| .|.|...     
Zfish   207 QQVRNESVVWFV--------FLPVAPVTT-----------AGPAI--PALAGVTIALGLLSALLL 250

  Fly   296 -HILCGPMTPSLIDRRGIATDEFIQQMQHQSSPRHALSDVLSASHMVTTSQPMMGGLGGGGIGGA 359
             |:||..:  .|:..| ::|.|:|.:.:|:.                                  
Zfish   251 GHLLCFHI--YLMWNR-LSTYEYIVRQRHRQ---------------------------------- 278

  Fly   360 GGGISIGGAELKPRFYDESNPSSSTLE---GNGGAINGHGNGHGNGFDHP-----PPSYDLVQNG 416
                ..|.:...|...|...|..:.::   ...|.:         |:.:|     .|.....|.|
Zfish   279 ----EAGDSRKPPPENDSGVPKLNLIKQQVSYSGTL---------GYTNPEMEVEDPKAMTSQEG 330

  Fly   417 KSRKHHQQ-RCSLQTL-----LPASAQQQFKAS--KHKHKQLKQHLV---AAELQ---------- 460
            .:|..:.: |||.:.:     ||:...:| |||  .|||.|.|:..|   |||:.          
Zfish   331 AARYGNGRIRCSSEHMDEEEHLPSVLTEQ-KASPHPHKHAQKKKRKVRKLAAEVNGDISIDTSTA 394

  Fly   461 --------QHEGGPGPGPNSPSL-LRSPATSSSYRLNLKRSLHLPLTPSYDDVRHSPLPLLHHHV 516
                    :.|........|.|| .|.|..:...|.:|.     ||.|    |:.:..|..:|..
Zfish   395 KGLQKTSAEKESSVAAATVSSSLGQRLPFPAFPLRASLP-----PLAP----VQAAGPPAEYHSD 450

  Fly   517 HAQQTTAIGTVAAAAAAVASGASGTNTGTGTGTGGSSSSATTTAPTSVSVSLATAPPPLAPRRPS 581
            .|:....|....|...:.|...:...|.|.|.:...||......|:|.:...|.:|.|...|:.:
Zfish   451 SAESLEEIPVAMARLGSAALAGAQIPTTTATASSSYSSMLQCALPSSAAGHAAPSPQPRTKRKTA 515

  Fly   582 --TLQLQASGAISASNSTLTTIHTTAPQAPAPTDFKYYSPQRSTDSNLMRNYPFPKAAR----GM 640
              |:..|....:..:.|...|..:..|..|         |:.|           |:||:    |.
Zfish   516 ARTVSEQRFEMLYHNPSMFMTRESGEPAIP---------PEES-----------PRAAKRKQTGK 560

  Fly   641 RRQSTMSVDSQKV 653
            :|.:..:..|.:|
Zfish   561 KRNTEDAKPSSRV 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 40/144 (28%)
zdhhc1XP_691086.3 DHHC 118..274 CDD:396215 55/210 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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