DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc8a

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_683670.3 Gene:zdhhc8a / 555918 ZFINID:ZDB-GENE-091118-26 Length:622 Species:Danio rerio


Alignment Length:642 Identity:173/642 - (26%)
Similarity:256/642 - (39%) Gaps:164/642 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LITGTSALFFAFDCPFLADSINPAIPIVGAVLYFFTMSSLLRTTFTDPGVIPRASNDEAAYIEKQ 116
            ::..:|.|||.|.||:||.|::||.|....||:.|.|::....||.|.||.|||:.||       
Zfish    16 ILVSSSTLFFVFTCPWLAVSVSPAFPPCVGVLFLFVMANFTMATFMDAGVFPRANEDE------- 73

  Fly   117 IEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVG 181
             :..:...:|.|    :|.|  |:|..|::|:|.:|..:||||.||||:||:||:.||||||||.
Zfish    74 -DKDDDFRAPLY----KTAE--VRGVQVRMKWCGSCHFYRPPRCSHCSVCDHCVEDFDHHCPWVN 131

  Fly   182 NCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLLMKKEHEVFNVIKAAPFTVIVVFICFFSIW 246
            ||:|:||||||:|||::|:...|.:||.:   |:.::.....::....|....|:.|...||.  
Zfish   132 NCIGRRNYRFFFLFLLTLSLHMVGVFSGA---LLFVLDHLENLWEPHAAVSLAVMSVSGLFFI-- 191

  Fly   247 SVIGLAGFHTYLTTSDQTTNEDLKGSFSSKGGPRTQNPYSRGNICLNCCHILCGPMTP----SLI 307
            .|:||:.||..|....:||||.:.|.|  :||   .||::|| .|.|...:|..|:||    .:.
Zfish   192 PVLGLSCFHLVLVARGRTTNEQVTGKF--QGG---VNPFTRG-CCQNLQFLLFSPVTPRYTGKVS 250

  Fly   308 DRRGIATDEFIQQMQHQSSPRHALSDVLSASHMVTTSQPMMGGLGGGGIGGAGGGISIGGAELKP 372
            ||..:.    ||...||..| |.|:.|.|                        ...||....|..
Zfish   251 DRLAVC----IQPPFHQPEP-HDLTPVKS------------------------NDSSIQSQTLTL 286

  Fly   373 RFYDE-SNPSSSTLEGNGGAINGHGNGHGNGFDHPPPSYDLVQNGKSRKHHQQRCSLQTLLPASA 436
            :..|| .:|.|..|                  ..|||                       ||   
Zfish   287 KCLDEDEDPDSKRL------------------TTPPP-----------------------LP--- 307

  Fly   437 QQQFKASKHKHKQLKQHLVAAE---LQQHEGGPGPGPNSPSLLRSPATSSSYRLNLKRSLHLPLT 498
                  .|.....|:.||...|   ||.....|.....||.......|...|:|. :..:.:.::
Zfish   308 ------PKPDPVLLRNHLAVLEESLLQSRALLPSGHNMSPLQSSESPTKELYQLT-RDQMGMRIS 365

  Fly   499 PSYDDVRHSPLPLLH--HHVHAQQTTAIGTVAAAAAAVASGASGTNTGTGTGTGGSSSSATTTAP 561
            |.......|...||.  :|:..|...::...:.:.:...|...|            |..|.|.||
Zfish   366 PLLSQEHASEPSLLQSDNHMSLQPINSLTLNSCSLSLKHSARRG------------SQRAETQAP 418

  Fly   562 TSVSVSLATAPPPLAPR----------RPSTLQLQ--------ASGAISASNSTLTTIHTTAPQA 608
            .::     ..|..|:.|          ||:..|:|        :.|.:...:....|..:...:.
Zfish   419 QTI-----PTPSALSSRSGSLSYDSLLRPAGHQMQFRPTDTNLSRGPVRTCSPVFLTGQSPQHRE 478

  Fly   609 PAPTDFKYYSPQRSTDSNLMRNYPFPKAARGMRRQSTMSVDSQKVNIAGYQPLPMRK 665
            |:|..:         ||     .|.|..:....|:......|...:.:|...:|.|:
Zfish   479 PSPVCY---------DS-----LPKPVMSSIQERREPEDKHSSTADASGIYDVPSRR 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 55/123 (45%)
zdhhc8aXP_683670.3 zf-DHHC 95..217 CDD:279823 55/126 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1264614at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.