DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc12

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_012825930.1 Gene:zdhhc12 / 550061 XenbaseID:XB-GENE-1216126 Length:276 Species:Xenopus tropicalis


Alignment Length:293 Identity:76/293 - (25%)
Similarity:121/293 - (41%) Gaps:72/293 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLLMSAPHTGVFY-LTCILITGTSALFFAFDCPF--------LADSINPAIPIVGAVLYFFTMSS 90
            |.|:...||.:.: :|.:|....:.:||......        |...::..:.::.:||.:|.:|.
 Frog     9 GFLVRTVHTVLTWGVTLVLFLHDTDIFFICHSDLYHQENQWKLLQPLSFGLLVLCSVLLYFAVSL 73

  Fly    91 LLRTTFTDPGVIPRASNDE--AAYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCK 153
            :      |||.:....|.:  ..|:|:.:.:|.:.:.                  ::|:.|..|.
 Frog    74 M------DPGYVLSDCNKKPLPTYLEQGVMIPEAPSG------------------MRLRRCGYCL 114

  Fly   154 IFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAV----------FIFS 208
            :.:|.||.||..|.:||.||||||||:.||||:||:..|.|:| .:.||.:          |.|.
 Frog   115 LQQPIRARHCKTCHHCVRRFDHHCPWIENCVGERNHPLFMLYL-GVQFLVLLWAFRLTWSGFQFE 178

  Fly   209 CSVT-----HLVLLMKKEHEVFNVIKAAPFTVIVVFICFFSIWSVIGLAGFHTYLTTSDQTTNED 268
            .|.|     ::.||:.       .|....||.:|..           |.|.|.||.:.:.||.|.
 Frog   179 ASWTEWLKVNIFLLLA-------FILTGIFTFVVAL-----------LLGCHCYLISCNVTTWEF 225

  Fly   269 LKGSFSS--KGGPRTQNPYSRGNICLNCCHILC 299
            :.....|  |......||:.:| |..|.....|
 Frog   226 MSHHRISYLKHYDSDTNPFDKG-IARNLWDFFC 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 48/138 (35%)
zdhhc12XP_012825930.1 DHHC 105..228 CDD:366691 48/141 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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