DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc23b

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001003757.1 Gene:zdhhc23b / 445301 ZFINID:ZDB-GENE-040808-13 Length:425 Species:Danio rerio


Alignment Length:400 Identity:93/400 - (23%)
Similarity:135/400 - (33%) Gaps:128/400 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLCC---------------CCCS------------NMAP-------------NQRVTRKWELFAG 27
            ||||               |||.            |..|             |.|:...|  .:|
Zfish    14 LLCCCEYIDRHGSRSHMVACCCDCEDLDEACDRWMNKEPQNPDSVSRALATINDRLRVPW--ISG 76

  Fly    28 RNKF---------------------YCDGLLM--SAPHTGVFYL--------TCILITGTS--AL 59
            ..:.                     |..|::|  :.|.|.::|.        ..:...|.:  :|
Zfish    77 ARQIDVSLIPPLILLPVFLHIAALHYLLGIIMLTAMPITVLWYYFFTHRKKGRTLFFLGLALFSL 141

  Fly    60 FFAFDCPFLAD--------SINPAIPIVGAVLYFFTMSSLLRTTFTDPGVI-PRASND------- 108
            |:.|.. ||..        .:..|:...|..|...    .|..|...||:: ||.|..       
Zfish   142 FYMFYL-FLTQVVPRGEVTELQLAVVTAGVALTVI----FLMLTKRGPGLVRPRPSETHSTVTYH 201

  Fly   109 ------EAAYI---EKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCS 164
                  :..|:   ..|:.:.:.:.|..:...|.|:|  .:....|..:|..||:.||.||.||.
Zfish   202 STPPDVDGVYLNGARHQVVIGSRVASSEHTGEPGTEE--EEEGVQKRNWCAVCKVVRPRRAGHCR 264

  Fly   165 LCDNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLL-MKKEHEVFNVI 228
            :|..||.|.||||.|:.:|||..|:|.|.|.|  |.||...||..|   |||. :..:..|...:
Zfish   265 ICGVCVLRLDHHCVWINSCVGLANHRTFLLTL--LFFLLTSIFGIS---LVLASVCPDQRVLTAL 324

  Fly   229 KAAP--FTVIVVFICFFSIW--SVIGLAGFH----TYLTTSDQTTNEDLKGSFSSKGGPRT---- 281
            ...|  ::.....:||...|  |::.....|    ..|..|...|..:.:.:...|...|.    
Zfish   325 FYCPDVYSQYSSALCFTCAWYSSIVTGGLLHLLLLQILNISLNVTEREARLALREKSAQRRLWGL 389

  Fly   282 ---QNPYSRG 288
               ...||||
Zfish   390 IVHTGHYSRG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 45/132 (34%)
zdhhc23bNP_001003757.1 7TMR-DISM_7TM <62..179 CDD:284997 20/123 (16%)
zf-DHHC <244..>350 CDD:303066 42/110 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.