DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and CG17196

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_651426.1 Gene:CG17196 / 43112 FlyBaseID:FBgn0039368 Length:276 Species:Drosophila melanogaster


Alignment Length:206 Identity:53/206 - (25%)
Similarity:89/206 - (43%) Gaps:33/206 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LTCILITGTSALFFAFDCPFLADSINPAIPIVGAVLYFFTMSSLLRTTFTDPGVIPRASNDEAAY 112
            |:.|.:..::..||.....::|..::.     |.:..||.:|::. ||:...|      |..|.|
  Fly    26 LSVIFLLVSTVFFFTLQVFYVAPDVHD-----GFMYKFFVISAIF-TTYNILG------NLLACY 78

  Fly   113 IEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHC 177
              :......||......|.|.|:.:        ..||..|:...|||:.||:||..|:.:.||||
  Fly    79 --RTSSAVKSLPQERQIPKPGTEHL--------WHYCDICQKLMPPRSWHCALCKCCILKRDHHC 133

  Fly   178 PWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLV-------LLMKKEHEVFNVIKA-APFT 234
            .:...|:|..|:|:|:.....|||   .||....|..|       ||.:.:....|.:|: :.|.
  Fly   134 IFAATCIGHNNHRYFFWLTFYLAF---GIFMSMATLFVDVGRSFYLLHRMKAGFGNTVKSLSYFR 195

  Fly   235 VIVVFICFFSI 245
            .:.:.:..|::
  Fly   196 YVCLILNIFAL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 33/108 (31%)
CG17196NP_651426.1 zf-DHHC 103..228 CDD:279823 33/107 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467546
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.