DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc16b

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_009304660.1 Gene:zdhhc16b / 393316 ZFINID:ZDB-GENE-040426-1301 Length:382 Species:Danio rerio


Alignment Length:308 Identity:61/308 - (19%)
Similarity:111/308 - (36%) Gaps:110/308 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GVFYLTCILITGTSALFFAFDC--PFLADSINPAIPIVGAVLY-----FFTMSSLLRTTFTDPGV 101
            ||.::..::...:|.:...:.|  |.:..|. |...|:..:.|     ...:....:.|.|.||.
Zfish    78 GVVFVCLVMALTSSVVVIVYLCVLPIIFSSY-PVYWILWHLCYGHWNLLMVVFHYYKATTTQPGF 141

  Fly   102 IPRASNDEAAYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLC 166
            .|:...|          :|                      ||.:  |..|.:.:|.|..|||:|
Zfish   142 PPQEKTD----------IP----------------------TVTI--CKKCIVPKPARTHHCSIC 172

  Fly   167 DNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLLMKKEHEVFNVIKAA 231
            :.|:.:.||||||:.||||..|:|:|:.|.:.:....|:   ||::...:.:    :.:|.|::.
Zfish   173 NRCILKMDHHCPWLNNCVGHFNHRYFFSFCLFMTMGCVY---CSISAKDMFL----DAYNAIESG 230

  Fly   232 PF------------------------------------------TVIVVFICFFSIWSVIG-LAG 253
            .:                                          :::.:::...|:...:| |..
Zfish   231 RYKGGASQGEAVPGAGLIYISFQHQSSYQTPPPAFTHQERMVHKSLVYLWVLTSSVAVALGALTL 295

  Fly   254 FHTYLTTSDQTTNE-----------DLKGSFSSKGGPRTQNPYSRGNI 290
            :|..|.|..:|:.|           .|:|..       .:|||..|.|
Zfish   296 WHAILITRGETSVERHINRKERRRLKLRGKL-------FRNPYHHGRI 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 36/177 (20%)
zdhhc16bXP_009304660.1 zf-DHHC 83..>206 CDD:327686 39/157 (25%)
zf-DHHC 154..310 CDD:307600 35/164 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.