DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and CG10344

DIOPT Version :10

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_611671.1 Gene:CG10344 / 37565 FlyBaseID:FBgn0034729 Length:278 Species:Drosophila melanogaster


Alignment Length:216 Identity:43/216 - (19%)
Similarity:64/216 - (29%) Gaps:81/216 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LSCGG---PNKLQIGVLLLGLCFL----SVGSGGIRPCSIPFGVDQFDQRTEE-------GVKGV 210
            |:|..   |..:..||..|.|.|:    :...|..:|..|. |::..::..||       ...||
  Fly   346 LNCRSFVTPQDVVNGVYKLNLAFVANLFNNHPGLDQPEEIE-GLESIEETREEKTYRNWMNSMGV 409

  Fly   211 ASFFNWYYMTFTVVLIITQTVVVYIQDQVSW---------------------------------- 241
            ....||.|......|||.|...:.....|.|                                  
  Fly   410 KPHVNWLYSDLADGLIIFQLFDIIQPGSVQWKRVHQKFTPLRKFMEKLENCNYAVELGKQQKFSL 474

  Fly   242 --IIGFSIPTGLMALAVVMFFAGMKRYVYVKPEGSIFSGIAQV----------------IVAARK 288
              |.|..:..|...|.:.:.:..|:.|..     ||.|.:|..                :.:|.|
  Fly   475 VGIAGQDLSDGNATLTLALIWQLMRAYTL-----SILSRLANTGNPIIEKEIVQWVNSKLQSAGK 534

  Fly   289 KRKLKLPAEDDGTVTYYDPAI 309
            :..||         ::.||||
  Fly   535 RTSLK---------SFQDPAI 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 DHHC 146..270 CDD:396215 31/159 (19%)
CG10344NP_611671.1 DHHC 93..220 CDD:396215
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.