DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and dhhc-13

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_500889.2 Gene:dhhc-13 / 186797 WormBaseID:WBGene00019257 Length:593 Species:Caenorhabditis elegans


Alignment Length:368 Identity:89/368 - (24%)
Similarity:140/368 - (38%) Gaps:144/368 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QRVTRKWELFAGRNKFY---CDGLLMSAPHTGVFYLT--CILITG---TSALFF---------AF 63
            ::||.:|  |.|  :|:   ..|:::.|. ||:::||  .:::.|   |:.|.|         .|
 Worm   269 EKVTSRW--FLG--QFFTATISGVMIGAA-TGLYFLTNFWVVLGGLALTALLLFILVQRRQMDQF 328

  Fly    64 DC------------PFLADSINPAIPIVGAVLYFFTMSSLLRTTF------TDPGVIPRASNDEA 110
            .|            .|.....|....:..:||.|.....::..:|      |:|||:||::....
 Worm   329 GCLPVTYIFWMGIAEFALLIFNSNGLVHWSVLIFVCSIWVISASFYWILILTNPGVLPRSTTPFK 393

  Fly   111 AYI----EKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCVD 171
            .:|    ||||:                            :|||||.|.:...:.|||.||.|||
 Worm   394 DFIKDLEEKQID----------------------------RYCFTCWIPKTSSSHHCSQCDKCVD 430

  Fly   172 RFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLLMKKEHEVFNVIKAAPFTVI 236
            .|||||||:..||.::|.|             .|:|.|    |.:.|              |.|.
 Worm   431 GFDHHCPWIHKCVYRKNLR-------------AFVFFC----LTIFM--------------FHVF 464

  Fly   237 VVFICFFSIWSVIGLAGFHTYLTTSDQTTNEDLKGSFSSKGGPRTQNPYSRG----NICLNCCHI 297
            .|.:..:.|.:.:..:||       :||.|:                   .|    ::.|...|:
 Worm   465 YVLLLLYMIGASMNASGF-------EQTLND-------------------HGLMVISLILAIPHV 503

  Fly   298 L-CGPMTPSLIDR--RGIATDEFI--QQMQHQS------SPRH 329
            . .|.:|.:...:  |.::|.|.|  |::|..|      ||.|
 Worm   504 FGAGAITCTQFSQISRHVSTIEIIRKQRLQRNSSEKTITSPEH 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 39/123 (32%)
dhhc-13NP_500889.2 ANK 42..155 CDD:238125
Ank_2 42..132 CDD:289560
ANK repeat 67..98 CDD:293786
ANK repeat 101..132 CDD:293786
Ank_5 121..176 CDD:290568
ANK 130..>240 CDD:238125
Ank_5 198..243 CDD:290568
ANK repeat 206..234 CDD:293786
zf-DHHC 405..530 CDD:279823 48/209 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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