DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and dhhc-1

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_510510.1 Gene:dhhc-1 / 181606 WormBaseID:WBGene00008606 Length:295 Species:Caenorhabditis elegans


Alignment Length:113 Identity:35/113 - (30%)
Similarity:53/113 - (46%) Gaps:23/113 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 KYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSV 211
            |:|.:|....|.||.||.:||.|:.|.||||.:...|||..|.|:|...:::|..:.:.:.|.|.
 Worm   103 KHCHSCHSMSPLRAHHCPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFIMTLPLVSYSW 167

  Fly   212 THLVLLMKKEHEVFNVIKAAPFTVIVVFICFFSIWSVI-----GLAGF 254
            :.|.:.|..|                  |.|.:||.|:     .:||:
 Worm   168 SLLNIKMTNE------------------IGFGNIWQVVIPHLAWIAGY 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 35/113 (31%)
dhhc-1NP_510510.1 zf-DHHC 98..240 CDD:279823 35/113 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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