DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and dhhc-6

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_502302.2 Gene:dhhc-6 / 178158 WormBaseID:WBGene00010892 Length:431 Species:Caenorhabditis elegans


Alignment Length:230 Identity:60/230 - (26%)
Similarity:92/230 - (40%) Gaps:51/230 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 HTG-VFYLTCILITGTSALFFAFDCPFLADSINPAIPIVGAVLYFFTMSSLLRTTFTDPGVIPRA 105
            |.| :|..:.|.:.|....|||.....:...:.....:...:..:.|:.:|...:|..||.:||.
 Worm    29 HFGTIFAFSTITMIGAVTTFFALQWMPVTSYMGLFNTLTFLLWNYLTIGNLFNASFFGPGYVPRG 93

  Fly   106 SNDEAAYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTVKLKYCFTCKIFRPPRASHCSLCDNCV 170
            ...|.|..||                             ||::|..|..|:.||:.|||.||.|.
 Worm    94 WRPENAADEK-----------------------------KLQFCVPCNGFKVPRSHHCSKCDRCC 129

  Fly   171 DRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAVFIFSCSVTHLVLLMKKEHEVF---------- 225
            .:.||||||:.||||.||:::|      |.||...:..|..:.::......|.:|          
 Worm   130 MKMDHHCPWINNCVGHRNHQYF------LRFLFFSVVGCIHSTIIDGSALYHAIFAGWYQKYGDG 188

  Fly   226 --NVIKAAPFTVIVVFICFFSIWSVIGLAGFHTYL 258
              .:|...|.:.|.:   .|:|...|.:|...|:|
 Worm   189 TEPIILLTPISFIAL---VFAIAMAIAVALALTFL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 40/125 (32%)
dhhc-6NP_502302.2 zf-DHHC 102..240 CDD:279823 43/157 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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