DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and GABPI

DIOPT Version :10

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_061517311.1 Gene:GABPI / 1277722 VectorBaseID:AGAMI1_011578 Length:415 Species:Anopheles gambiae


Alignment Length:393 Identity:83/393 - (21%)
Similarity:124/393 - (31%) Gaps:144/393 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCCCCSNMAPN-------------------------QRVTRKWELFAGRNKFYCDG--------- 35
            |||||....|:                         .|:...|.  .|..:...|.         
Mosquito    42 CCCCCCFTGPSGIETPTPATSKLTGSRVGNMLLTFQDRLRIPWR--GGAKQITLDNVVTLAILIG 104

  Fly    36 -LLMSAPHTGVFYLTCILI---------------------TGTSALFFAFDCPFLADSINPAIPI 78
             ||::|.|   ||| |::|                     |....::|...|.:|......|:|:
Mosquito   105 TLLLTAVH---FYL-CLVIMLLLPLVLLYLKRLFGTIHPKTKFFTIWFFGSCVYLVALFELAVPL 165

  Fly    79 --------VG-AVLYFFTMSSLLRTTFTDPGVIPRASNDEAAYIEKQIEVPNSLNSPTYRPPPRT 134
                    || .||.......||:.             .:.|.:.....:|..:|.  ......:
Mosquito   166 LEILPQENVGFVVLMTLAFLCLLKA-------------KQRAVLNHLSALPADMNG--VESGKGS 215

  Fly   135 KEVLV----------------KGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNC 183
            ||.:|                .|:..    |..|:.:.|||..||.:|.:||.|.|||..|:..|
Mosquito   216 KEQIVLFSDRDDSDDGATDSDSGRLA----CQLCRKYVPPRTYHCKVCSSCVLRQDHHNVWLNCC 276

  Fly   184 VGKRNYRFFYLFLVSLAF--LAVFIFS-------CSVTHLVLLMKKEHEVFNVIKAAPFTVIVVF 239
            :||.|:|   |:|....|  ||:.:|:       |..|.:..|       :.:|...|.....:|
Mosquito   277 IGKSNHR---LYLAGCLFTLLALLVFANLALTAVCHPTPIFTL-------YGIIVMMPDDCTDIF 331

  Fly   240 ------ICFF-SIWSVIGLAGFHTYLTTSDQTTNEDLKGSFSSKGGPRTQNPYSRGNICLNCCHI 297
                  :||. |::::| :|.|..........|           |.|...|...........|.|
Mosquito   332 FQYDIALCFTGSVYALI-MASFIAIAIVKQVCT-----------GRPSNGNENHSNTFTFQICFI 384

  Fly   298 LCG 300
            ..|
Mosquito   385 SFG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 DHHC 146..270 CDD:396215 39/139 (28%)
GABPIXP_061517311.1 None

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