DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment app and zdhhc23a

DIOPT Version :9

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_021327278.1 Gene:zdhhc23a / 100150190 ZFINID:ZDB-GENE-060526-38 Length:434 Species:Danio rerio


Alignment Length:359 Identity:89/359 - (24%)
Similarity:132/359 - (36%) Gaps:84/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCCCCSNMAPN-QRVTR----KWELFAGRNKFYCDGLLMSAPHTGVFYL------TCILITGTSA 58
            |||.|..:... :|:.|    |.::|:.......|.|.:|....|...|      ..:||.|...
Zfish    28 CCCDCEELDDACERLLRGEPDKPDVFSRFISRMADRLGVSCCTVGPLRLELSVLPPMVLIPGLLR 92

  Fly    59 LFFAFDCPFLADSINPAIPIVGAVLYFFTMSSLLRTTF-----------------TDPGVIPRA- 105
            : .|.:| .|...|..|:|::....|:.|.....||.|                 |:  ::||. 
Zfish    93 V-AAINC-LLGVIILTALPLLVLWYYYMTHRRKRRTLFFLSLALFSLAYMYYLFLTE--IVPRGD 153

  Fly   106 -------------------------------SNDEAAYIEKQIEVPNSLNSPTYRPPPRTKEVLV 139
                                           |...|..|...:....|.|. |.....|.....:
Zfish   154 VTHLQVVTATTGMMLTLISLVRTKQGPGFVKSQSLALGINSSLATNRSTNL-TLDTDLRNGVSHL 217

  Fly   140 KGQTVKLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFFYLFLVSLAFLAV 204
            ||:....|.|..|::.|||||.||.:|..||.|.||||.|:.:|||:.|:|.|.|.|  |.||..
Zfish   218 KGEKDVKKKCPVCQLVRPPRAGHCRICGACVLRMDHHCVWINSCVGQANHRQFILTL--LLFLLT 280

  Fly   205 FIFSCSVTHLVLLMKKEHEVFNVIKAAP--FTVIVVFICFFSIW-SVIGLAG-FHTY----LTTS 261
            ..:..|:....:..|:  .:|..:...|  :......:||..:| |||...| .|.:    :..|
Zfish   281 SFYGISLVLRSICPKQ--SLFTAMLYCPGVYNQYSTALCFTCVWYSVIITGGLLHLFILQIINVS 343

  Fly   262 DQTTNEDLKGSFSSKGGPR-------TQNPYSRG 288
            ...|..:.:.:..:|.|.|       ....:|||
Zfish   344 CNVTEREAQIALRNKTGRRRFCGLVVETGDHSRG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 zf-DHHC 146..270 CDD:279823 44/131 (34%)
zdhhc23aXP_021327278.1 zf-DHHC 224..352 CDD:307600 44/131 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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