DRSC/TRiP Functional Genomics Resources

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Protein Alignment app and zdhhc20b

DIOPT Version :10

Sequence 1:NP_648561.2 Gene:app / 39399 FlyBaseID:FBgn0260941 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001410739.2 Gene:zdhhc20b / 100001188 ZFINID:ZDB-GENE-091117-30 Length:409 Species:Danio rerio


Alignment Length:227 Identity:68/227 - (29%)
Similarity:103/227 - (45%) Gaps:48/227 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SLLRTTFTDPG------VIPRASNDEAAYIEKQIEVPNSLNSPTYRPPPRTKEVLVKGQTV---- 144
            |..:|.||.|.      .:|::..::   .||:            :.|...:|:|.|..|.    
Zfish    97 SYWKTIFTKPANPSKEFCLPKSEKEQ---YEKE------------QRPETQQEILKKVATSLPLY 146

  Fly   145 ------KLKYCFTCKIFRPPRASHCSLCDNCVDRFDHHCPWVGNCVGKRNYRFFYLF----LVSL 199
                  .::||..|::.:|.|..|||.||.||.:.|||||||.||||..||:||.||    ||..
Zfish   147 TRTGAGAIRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFILFLTYSLVYC 211

  Fly   200 AFLAVFIFSCSVTHLVLLMKKEHEVFNVIKA------APFTVIVVFI--CFFSIWSVIGLAGFHT 256
            .|:|..:....:....|..:|..|  |..|:      |.|.|:.:|.  ..|.| |::.|..:|.
Zfish   212 LFIAASVLQYFIKFWTLCRRKSAE--NCPKSDLPESHAKFHVLFLFFVAAMFCI-SILSLFTYHL 273

  Fly   257 YLTTSDQTTNEDLKGSFSSKGGPRTQNPYSRG 288
            :|...:::|.|..:... .:.|| .:|.:|.|
Zfish   274 WLVGKNRSTIEAFRAPV-FRNGP-DKNGFSLG 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
appNP_648561.2 DHHC 146..270 CDD:396215 50/135 (37%)
zdhhc20bNP_001410739.2 None

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