DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen54 and SEN54

DIOPT Version :10

Sequence 1:NP_648559.1 Gene:Tsen54 / 39397 FlyBaseID:FBgn0036266 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_015242.1 Gene:SEN54 / 856022 SGDID:S000006004 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:401 Identity:79/401 - (19%)
Similarity:130/401 - (32%) Gaps:149/401 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QD-SEYVEIHPKNSYLSAQELIAHRHTEFEPPSGGLKRTKNEGTAAEVEELKRAQEYLRAQLSVP 69
            || |:...:..||:.||.             |..|.|..:.:||        ..|:.|....|..
Yeast    30 QDWSQLASLVSKNAALSL-------------PKRGEKDYEPDGT--------NLQDLLLYNASKA 73

  Fly    70 RIERLGG--RALAIWNE--------EQQVAEVKRKDGKFENFGYSEQ-GKLYLEYYEAMFLLEVG 123
            ..:.:..  |...:.:|        :.|...:|.|....:..|.::. |:|:|:::|.::|.|.|
Yeast    74 MFDTISDSIRGTTVKSEVRGYYVPHKHQAVLLKPKGSFMQTMGRADSTGELWLDFHEFVYLAERG 138

  Fly   124 RLQLEYCGLVVSIEQAYVLLLGELESERYTNYLVYSALSRSGYIVVKHVPPKEIPQEVTSADCIW 188
            .: |.|          |.|..|..:|.::...::.|                             
Yeast   139 TI-LPY----------YRLEAGSNKSSKHETEILLS----------------------------- 163

  Fly   189 ALLKEKVGNLPVPDHIKTSPIYPIAEKRMEDLKELITSQKAEDPNIVVDPIDLKFGQRKRMA-VE 252
                                        ||||..|.:||:..|...|       |...||:. :.
Yeast   164 ----------------------------MEDLYSLFSSQQEMDQYFV-------FAHLKRLGFIL 193

  Fly   253 KPIEEPASKKEKF-----------STTGRSL----VDQLK--GEFAYAKFEEIFEKFD------- 293
            ||..:.|:.|..|           :.|.|.|    :.:|.  ..|.|:|:...|.|:.       
Yeast   194 KPSNQEAAVKTSFFPLKKQRSNLQAITWRLLSLFKIQELSLFSGFFYSKWNFFFRKYTTSPQLYQ 258

  Fly   294 ----LVQLESQDYTKDE-LDTPS--------ALKIIFDLHLHNRGFKKSAPNAPNFNVIILPSQ- 344
                ||:..:....|.| ||..|        .:.:.|.:...:..|||..|..|:|.|.:.... 
Yeast   259 GLNRLVRSVAVPKNKKELLDAQSDREFQKVKDIPLTFKVWKPHSNFKKRDPGLPDFQVFVYNKND 323

  Fly   345 --VAFPTHDKI 353
              ..|||:.::
Yeast   324 DLQHFPTYKEL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen54NP_648559.1 tRNA_int_end_N2 66..129 CDD:463754 15/73 (21%)
SEN54NP_015242.1 tRNA_int_end_N2 75..144 CDD:463754 15/79 (19%)

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