DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsen54 and AT3G02370

DIOPT Version :10

Sequence 1:NP_648559.1 Gene:Tsen54 / 39397 FlyBaseID:FBgn0036266 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001319450.1 Gene:AT3G02370 / 821119 AraportID:AT3G02370 Length:205 Species:Arabidopsis thaliana


Alignment Length:294 Identity:63/294 - (21%)
Similarity:103/294 - (35%) Gaps:112/294 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VAEVKRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQL--EYCGLVVSIEQAYVLLLGELES 149
            :|||:.|.|| :...|....||.|....||::|.|:|.|||  :...:|:|::..|    ||:..
plant     1 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLY----GEIAE 61

  Fly   150 ERY----TNYLVYSALSRSGYIVVKHVPPKEIPQEVTSADCIWALLKEKVGNLPVPDHIKTSPIY 210
            .:|    .||.||..|...|||:.:|..|             |. .|..|...|           
plant    62 GKYGCCWENYEVYRYLKGLGYILGRHGVP-------------WT-TKYAVNTTP----------- 101

  Fly   211 PIAEKRMEDLKELITSQKAEDPNIVVDPIDLKFGQRKRMAVEKPIEEPASKKEKFSTTGRSLVDQ 275
                             ..||.::..                                       
plant   102 -----------------SDEDESLCA--------------------------------------- 110

  Fly   276 LKGEFAYAKFEEIFEKFDLV-QLESQDYTKDELDTPSALKIIFDLHLHNRGFKKSAPNAPNFNVI 339
                      .|.|:..|.| :|.|..:..|       .:.:||::|.|..||||:|..|:|  :
plant   111 ----------AEFFQDRDSVTKLLSDMHICD-------ARPVFDVYLPNSQFKKSSPGEPSF--V 156

  Fly   340 ILPSQVAFPTHDKISKIKHLLTAPLLVISVSESK 373
            ...|..:.|:.::|..::..:.:||:...:::.:
plant   157 TCFSGDSPPSKEEIKVLQKCIVSPLMFCHIAQGR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsen54NP_648559.1 tRNA_int_end_N2 66..129 CDD:463754 18/43 (42%)
AT3G02370NP_001319450.1 tRNA_int_end_N2 <1..41 CDD:463754 16/39 (41%)
tRNA_int_end_N2 <29..>83 CDD:480673 20/57 (35%)

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