DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11529 and psh

DIOPT Version :10

Sequence 1:NP_648558.1 Gene:CG11529 / 39395 FlyBaseID:FBgn0036264 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:235 Identity:77/235 - (32%)
Similarity:118/235 - (50%) Gaps:40/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 CGGTLLDKRWILTAGHC--TMGVTHYDVYLGTKSVEDTEVS-GGLVLRSNKFIVHERFNPETAAN 120
            |||:|:..|::|||.||  |...|...|.||..::|:.:.| ..:|:||.|  :|.:: .....|
  Fly   172 CGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHSYQDIVIRSVK--IHPQY-VGNKYN 233

  Fly   121 DIALVKLPQDVAFTPRIQPASLPSRYRH----DQFAGMSVVASGWGAMVEMTNSDS--MQYTELK 179
            |||:::|.:||..|..|:||.|     |    |..:......:|||.:...|.:.|  :....|:
  Fly   234 DIAILELERDVVETDNIRPACL-----HTDATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLE 293

  Fly   180 VISNAECAQEY-------DVVTSGVI----CA---KGLKDETVCTGDSGGPLV----LKD-TQIV 225
            ::...:|...|       .::..|||    ||   |.:.|  .|.|||||||:    ::| ...:
  Fly   294 LVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIAD--ACKGDSGGPLIHELNVEDGMYTI 356

  Fly   226 VGITSFGPADGCETNIPGGFTRVTHYLDWIESKIGSHGQV 265
            :|:.|.|  .||.|..||.:|||:.|||:||..:....:|
  Fly   357 MGVISSG--FGCATVTPGLYTRVSSYLDFIEGIVWPDNRV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11529NP_648558.1 Tryp_SPc 37..258 CDD:238113 76/226 (34%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 76/226 (34%)
Blue background indicates that the domain is not in the aligned region.

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