DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11529 and Tmprss3

DIOPT Version :10

Sequence 1:NP_648558.1 Gene:CG11529 / 39395 FlyBaseID:FBgn0036264 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:237 Identity:85/237 - (35%)
Similarity:128/237 - (54%) Gaps:28/237 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IEKFPYQVMLIGKQLWRKRILCGGTLLDKRWILTAGHCTMGVTH---YDVYLGTKSVEDTEVSGG 99
            :.::|:||.|    .::...||||:::...||:||.||...:.|   :.|.:|..|:.|:.|...
  Rat   225 LTQWPWQVSL----QFQGYHLCGGSVITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSH 285

  Fly   100 LVLRSNKFIVHERFNPETAANDIALVKLPQDVAFTPRIQPASLPSRYRHDQFA-GMSVVASGWGA 163
            ||   .|.|.|.::.|:...|||||:||.:.:.|...|||..||:  ..:.|. |.....|||||
  Rat   286 LV---EKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPN--SEENFPDGKLCWTSGWGA 345

  Fly   164 MVEMTNSDS--MQYTELKVISNAECAQE--Y-DVVTSGVICA---KGLKDETVCTGDSGGPLVLK 220
            ..:.....|  :.:..:.:|||..|...  | .:::..::||   ||..|.  |.||||||||.:
  Rat   346 TEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDS--CQGDSGGPLVCQ 408

  Fly   221 DTQI--VVGITSFGPADGC-ETNIPGGFTRVTHYLDWIESKI 259
            :.::  :||.||||  .|| |.|.||.:||:|.:||||..::
  Rat   409 ERRLWKLVGATSFG--IGCAEVNKPGVYTRITSFLDWIHEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11529NP_648558.1 Tryp_SPc 37..258 CDD:238113 85/234 (36%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747
Tryp_SPc 216..444 CDD:214473 83/231 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.