Protein Alignment thoc6 and Thoc6

DIOPT Version :10

• Sequence 1: NP_648557.1
• Gene: thoc6 / 39394
• FlyBaseID: FBgn0036263
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_063125983.1
• Gene: Thoc6 / 79227
• RGDID: 708553
• Length: 367
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 87/278 - (31%)
• Similarity: 144/278 - (51%)
• Gaps: 6/278 - (2%)

  Fly     6 LKRAYNNVLAQAISGSKQYLFAGNLFGDIFVLRIK-ELDKGSEEPPGKLKIFPQGSDVDINYLAF 69
            |:|.:..:.:|::|...::|.|||.:|.|.:..:. .|...::|...|..:.....|..:..:..
  Rat    20 LQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPMVTFHAHDGPVYSMVS 84

  Fly    70 HRDFLIVGAVGLIYGLEWNEEEESLATKRSWEVKIPMQVDAVEVPDVNSMWL-DSENSILFAGCG 133
            ....|:....|.:.|..|.|..:. ..|..|..:.|.:. ::|||::|::.| ..|||::.|| |
  Rat    85 TDRHLLSAGDGEVKGWLWAEILKK-GCKELWRRQPPYRT-SLEVPEINALLLVPKENSLILAG-G 146

  Fly   134 DGVIYQVSLEDGRIQREYRGHTDYVHSV-VGNANGQIFSGAEDGTVRVWSTKQQQHTSMLEPYKN 197
            |..::.:.||.|...|..||||||:|.: :...:.::.||.|||.||:|..:..:....:|.||:
  Rat   147 DCQLHTMDLETGTFTRALRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKH 211

  Fly   198 PNLLRPDWGKWIGAVAVNEDWLLCGGGPKASIFHLRSMESTCVFSFPGRVHLCDFVDDCVLIGGE 262
            ....||..|:|||.:|.:.||::|||||..:::||||...|.||..........|..|.:|..|:
  Rat   212 EECSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQ 276

  Fly   263 HNHVQSYTLNGVLQANIP 280
            ...|..:.|:|.|:|.:|
  Rat   277 GCCVNHWQLSGELKAQVP 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
thoc6	NP_648557.1	WD40	<11..184	CDD:441893	51/175 (29%)
		WD40	<115..265	CDD:475233	56/151 (37%)
		WD40 repeat	159..194	CDD:293791	9/35 (26%)
		WD40 repeat	209..244	CDD:293791	17/34 (50%)
		WD40 repeat	249..280	CDD:293791	9/30 (30%)
		WD40 repeat	286..320	CDD:293791
Thoc6	XP_063125983.1	None