DRSC/TRiP Functional Genomics Resources

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Protein Alignment thoc6 and tle2a

DIOPT Version :9

Sequence 1:NP_001261750.1 Gene:thoc6 / 39394 FlyBaseID:FBgn0036263 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001124076.1 Gene:tle2a / 565013 ZFINID:ZDB-GENE-030131-2826 Length:811 Species:Danio rerio


Alignment Length:314 Identity:73/314 - (23%)
Similarity:115/314 - (36%) Gaps:108/314 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VLAQAISGSKQYLFAGNLFGDIFVLRIKELDKGSEEPPGKL------------KIFPQGSDVDIN 65
            |.|..||.|.::::.|.. |.:.|..|.:  .||:.|..:|            |:.|.|..    
Zfish   528 VCAVTISTSTRHVYTGGK-GCVKVWDISQ--PGSKSPMAQLDCLNRDNYIRSCKLLPDGRT---- 585

  Fly    66 YLAFHRDFLIVGAVGLIYGLEWNEEEESLATKRSWEVKIPMQVDAVEV----PDVNSMWLDSENS 126
                    ||||.              ..:|...|::..|......|:    |...::.:..:|.
Zfish   586 --------LIVGG--------------EASTLSIWDLATPTPRIKAELTSSAPACYALAISPDNK 628

  Fly   127 ILFAGCGDGVIYQVSLEDGRIQREYRGHTDYVHSV-VGNANGQIFSGAEDGTVRVWSTKQ----Q 186
            :.|:.|.||.|....|.:..:.|:::||||....: :.|...::::|..|.|||.|..::    |
Zfish   629 VCFSCCSDGNIVVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQ 693

  Fly   187 QH--TSML---------------EPYKNPNLL---RPD------------------WGKWIGAVA 213
            ||  ||.:               ....|..:|   :||                  .|||.  |:
Zfish   694 QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVSKPDKYQLHLHESCVLSLKFAYCGKWF--VS 756

  Fly   214 VNED-----WLLCGGGPKASIFHLRSMESTCVFSFPGRVHLCDF-VDDCVLIGG 261
            ..:|     |....|   :|||  :|.||:.|.|       ||. .||..::.|
Zfish   757 TGKDNLLNAWRTPYG---SSIF--QSKESSSVLS-------CDISPDDQFIVTG 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thoc6NP_001261750.1 WD40 <45..325 CDD:225201 64/282 (23%)
WD40 <115..265 CDD:295369 48/196 (24%)
WD40 repeat 159..194 CDD:293791 12/56 (21%)
WD40 repeat 209..244 CDD:293791 12/39 (31%)
WD40 repeat 249..280 CDD:293791 5/14 (36%)
WD40 repeat 286..320 CDD:293791
tle2aNP_001124076.1 TLE_N 33..162 CDD:281857
WD40 <517..809 CDD:225201 73/314 (23%)
WD40 519..808 CDD:238121 73/314 (23%)
WD40 repeat 528..567 CDD:293791 13/41 (32%)
WD40 repeat 575..613 CDD:293791 11/63 (17%)
WD40 repeat 618..654 CDD:293791 8/35 (23%)
WD40 repeat 661..696 CDD:293791 9/34 (26%)
WD40 repeat 701..734 CDD:293791 4/32 (13%)
WD40 repeat 742..776 CDD:293791 10/40 (25%)
WD40 repeat 783..807 CDD:293791 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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