DRSC/TRiP Functional Genomics Resources

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Protein Alignment thoc6 and thoc6

DIOPT Version :10

Sequence 1:NP_648557.1 Gene:thoc6 / 39394 FlyBaseID:FBgn0036263 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_031749611.1 Gene:thoc6 / 100498236 XenbaseID:XB-GENE-1010273 Length:333 Species:Xenopus tropicalis


Alignment Length:325 Identity:104/325 - (32%)
Similarity:162/325 - (49%) Gaps:22/325 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KDLKRAYNNVLAQAISGSKQYLFAGNLFGDIFVLRI--------KELDKGSEEPPGKLKIFPQGS 60
            :.|:..:..|.:|..|...:||.|||..|.|.|..:        |||   |::|   :.||...|
 Frog    11 RSLELLHMTVFSQCFSPCGKYLVAGNNLGQIGVFSLSAALSSEAKEL---SKQP---VAIFQAHS 69

  Fly    61 DVDINYLAFHRDFLIVGAVGLIYGLEWNEEEESLATKRSWEVKIPMQVDAVEVPDVNSMWL-DSE 124
            ....:.::..|..:..|. ..:.|..||:.::...| :.|...||.:.: :|.|::|||.| :.:
 Frog    70 GPIYSLISTERHLISSGG-NEVKGWNWNDIQKKGCT-QLWTRCIPSRSN-LESPEINSMILNEKD 131

  Fly   125 NSILFAGCGDGVIYQVSLEDGRIQREYRGHTDYVHSV-VGNANGQIFSGAEDGTVRVWSTKQQQH 188
            ||:|.|| |...|:.:.||.|.......||.||:|.: :.....:..||.||||||:|..:....
 Frog   132 NSLLLAG-GTCNIHSMDLESGTFTMALEGHEDYIHCLALREQQRECVSGGEDGTVRIWDLRNGAQ 195

  Fly   189 TSMLEPYKNPNLLRPDWGKWIGAVAVNEDWLLCGGGPKASIFHLRSMESTCVFSFPGRVHLCDFV 253
            |..:|.||.....||.:||||..:..:.||::||||||.|::||||:..|.:|..........|.
 Frog   196 THKIEVYKYEECARPQYGKWISCLTTDSDWMVCGGGPKLSLWHLRSVTPTTIFPLNESQQQVMFY 260

  Fly   254 DDCVLIGGEHNHVQSYTLNGVLQANIPVEHTACYS-AVWQTS-PIKFISIAGFSNKLHILKDFRF 316
            .|.:|..|:..:|....:||.::|.||......|| :|.:.| ..|.::.||...|:.:..:||:
 Frog   261 QDMILCAGQGPYVNHCQINGDIKAQIPSTPRCVYSLSVNEASQENKVLTAAGSGPKIDVFTNFRY 325

  Fly   317  316
             Frog   326  325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thoc6NP_648557.1 WD40 <11..184 CDD:441893 58/182 (32%)
WD40 <115..265 CDD:475233 57/151 (38%)
WD40 repeat 159..194 CDD:293791 11/35 (31%)
WD40 repeat 209..244 CDD:293791 16/34 (47%)
WD40 repeat 249..280 CDD:293791 8/30 (27%)
WD40 repeat 286..320 CDD:293791 10/33 (30%)
thoc6XP_031749611.1 WD40 repeat 21..67 CDD:293791 17/53 (32%)
WD40 <25..268 CDD:475233 84/252 (33%)
WD40 repeat 72..118 CDD:293791 9/45 (20%)
WD40 repeat 123..158 CDD:293791 14/35 (40%)
WD40 repeat 164..203 CDD:293791 13/39 (33%)
WD40 repeat 211..249 CDD:293791 18/37 (49%)

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