DRSC/TRiP Functional Genomics Resources

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Protein Alignment thoc6 and thoc6

DIOPT Version :9

Sequence 1:NP_001261750.1 Gene:thoc6 / 39394 FlyBaseID:FBgn0036263 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001006095.1 Gene:thoc6 / 100004014 ZFINID:ZDB-GENE-041010-198 Length:323 Species:Danio rerio


Alignment Length:314 Identity:93/314 - (29%)
Similarity:155/314 - (49%) Gaps:16/314 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NVLAQAISGSKQYLFAGNLFGDIFVLRIK-ELDKGSEEPPGKLKIFPQGSDVDINYLAFHRDFLI 75
            :|.:|:.|...:||.|||.:|:|.|..:. .|...:.|...|..:.....|..:..|......|:
Zfish    10 SVFSQSFSPCGRYLAAGNNYGEIAVFSLSAALSPDASERSQKPILNFTAHDGPVFSLLSTESHLL 74

  Fly    76 VGAVGLIYGLEWNEEEESLATKRSWEVKIPMQVDAVEVPDVNSMWLDSENSILFAGCGDGVIYQV 140
            ....|.|....|.|..:. :||.:|..| |....::|:|::|:|.::.:::.|..|.||..|:.:
Zfish    75 SAGNGEISAWSWAELIKK-STKAAWTRK-PNYETSLEIPEINAMIINPKDNNLIVGGGDNNIHIM 137

  Fly   141 SLEDGRIQREYRGHTDYVHSV-VGNANGQIFSGAEDGTVRVWSTKQQQHTSMLEPYKNPNLLRPD 204
            .:|.|..:...:|||||:|.: .....|:|.||.|||.||:|.::..:....:|.:|.....||.
Zfish   138 DMETGTFKSVLKGHTDYIHCLSFKEREGEILSGGEDGAVRIWDSRTNRPVHCIEVFKYEECARPQ 202

  Fly   205 WGKWIGAVAVNEDWLLCGGGPKASIFHLRSMESTCVFSFPGRVHLCDFVDDCVLIGGEHNHVQSY 269
            :||||..:|.:.||:||||||..|::|||||..|.||...|.........|.::..||..:|...
Zfish   203 FGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFPLSGCQREAVSYQDLIMSVGEGPYVSHC 267

  Fly   270 TLNGVLQANIPVEHTACYSAVWQTSPI-------KFISIAGFSNKLHILKDFRF 316
            ...|.::|.||     |..:...|..:       :.:::.|.|:::.:..:|.:
Zfish   268 LHGGTVKAQIP-----CSPSSLNTLALNLKNTEHRVMTVGGSSHQIDVFTNFSY 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
thoc6NP_001261750.1 WD40 <45..325 CDD:225201 81/280 (29%)
WD40 <115..265 CDD:295369 55/150 (37%)
WD40 repeat 159..194 CDD:293791 11/35 (31%)
WD40 repeat 209..244 CDD:293791 19/34 (56%)
WD40 repeat 249..280 CDD:293791 6/30 (20%)
WD40 repeat 286..320 CDD:293791 5/38 (13%)
thoc6NP_001006095.1 WD 1 6..45 12/35 (34%)
WD40 <10..>240 CDD:225201 78/231 (34%)
WD40 <11..215 CDD:295369 62/205 (30%)
WD40 repeat 16..58 CDD:293791 12/42 (29%)
WD 2 58..96 8/37 (22%)
WD40 repeat 63..99 CDD:293791 8/35 (23%)
WD 3 108..147 11/38 (29%)
WD40 repeat 114..149 CDD:293791 9/34 (26%)
WD 4 150..189 16/39 (41%)
WD40 repeat 155..194 CDD:293791 13/39 (33%)
WD 5 200..238 22/37 (59%)
WD40 repeat 202..230 CDD:293791 14/27 (52%)
WD 6 279..321 5/43 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8932
eggNOG 1 0.900 - - E1_KOG0649
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11533
Inparanoid 1 1.050 152 1.000 Inparanoid score I4318
OMA 1 1.010 - - QHG50131
OrthoDB 1 1.010 - - D447320at33208
OrthoFinder 1 1.000 - - FOG0007004
OrthoInspector 1 1.000 - - oto40159
orthoMCL 1 0.900 - - OOG6_106439
Panther 1 1.100 - - LDO PTHR44411
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5889
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.840

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