DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH2 and ca6

DIOPT Version :9

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001072482.1 Gene:ca6 / 779937 XenbaseID:XB-GENE-494019 Length:121 Species:Xenopus tropicalis


Alignment Length:83 Identity:36/83 - (43%)
Similarity:46/83 - (55%) Gaps:3/83 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YQFEQFHFHWG--ENDTIGSEDLINNRAYPAELHVVLRNL-EYPDFASALDKDHGIAVMAFFFQV 178
            |...|.|.|||  |::|.|||..|:...|.||||||..|. .|..|..|.||.:|:||:||.:..
 Frog    11 YTAVQMHLHWGGLESETSGSEHTIDGMRYLAELHVVHYNSGTYKTFDEAKDKPNGLAVLAFLYTT 75

  Fly   179 GDKSTGGYEGFTNLLSQI 196
            |:.....|..|.:.||:|
 Frog    76 GNYENTYYSDFISKLSKI 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 28..281 CDD:215000 36/83 (43%)
ca6NP_001072482.1 alpha_CA <1..>96 CDD:320708 36/83 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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