DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and ca16b

DIOPT Version :9

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_001919055.3 Gene:ca16b / 569183 ZFINID:ZDB-GENE-080818-1 Length:1382 Species:Danio rerio


Alignment Length:324 Identity:102/324 - (31%)
Similarity:160/324 - (49%) Gaps:43/324 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FGYEGRHGPEHWSEDYARCSGKHQSPINI-DQVSAVEKKFPKLEFFNFKVVPDN-LQMTNNGHTV 90
            :.|.|.:||..|:..|..|..::|||::| |..:.|.::..:|....|:....| ..|.|.|.||
Zfish    55 WAYSGTYGPRRWASAYPECGERNQSPVDILDPETQVSQECQELTLDGFETKSSNRTTMKNTGKTV 119

  Fly    91 --LVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGE-NDTIGSEDLINNRAYPAELHVVLR 152
              ::|..|      .|||..|    |..::.|:..||||. |.:.|||..||.:.:|.|:.:...
Zfish   120 SIVLKNDY------FVRGAGL----PGRFKAEKVEFHWGSTNGSAGSEHSINGKKFPVEMQIYFY 174

  Fly   153 NL-EYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGKSVNMTNPLPLGEYIS 216
            |. ::...::|:.:...||.||.||||..|.....|.....|.::....|..|:.:.: |.:.:.
Zfish   175 NSDDFDSLSTAIKERRIIAAMAVFFQVATKDNIAAEPIIAGLKRVVHHEKETNLGSFI-LRDLLP 238

  Fly   217 KSVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQLNAFRLL--TANDDH------LKNNFRP 273
            .|:.||:.|||||||||||:.|.||.|:.|:.::..||.||..:  |...||      |:||.||
Zfish   239 SSLGSYYRYTGSLTTPPCSKVVEWIIFSRPVYLSYHQLEAFYSIFTTEQQDHVKSVDYLRNNHRP 303

  Fly   274 IQPLNDRTLYKNYIEIPIHNMGSIPLVDA------ENAAGKWRAQAAAVLLPLVVLAALSRTSI 331
            ||.|:.|.::|:            .|:||      .:||....::..:.:...:.|..|:||::
Zfish   304 IQDLDSRRIFKS------------ALMDAWMPETMASAADTETSRVCSSIPDNMKLHPLNRTAL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 28..281 CDD:215000 91/266 (34%)
ca16bXP_001919055.3 alpha_CARP_receptor_like 62..314 CDD:239396 90/262 (34%)
FN3 340..417 CDD:214495 4/16 (25%)
Herpes_BLLF1 450..>557 CDD:330317
PTPc 790..1057 CDD:214550
PTPc 1089..1347 CDD:214550
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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