DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH2 and ca16b

DIOPT Version :10

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_021332937.1 Gene:ca16b / 569183 ZFINID:ZDB-GENE-080818-1 Length:1382 Species:Danio rerio


Alignment Length:324 Identity:102/324 - (31%)
Similarity:160/324 - (49%) Gaps:43/324 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FGYEGRHGPEHWSEDYARCSGKHQSPINI-DQVSAVEKKFPKLEFFNFKVVPDN-LQMTNNGHTV 90
            :.|.|.:||..|:..|..|..::|||::| |..:.|.::..:|....|:....| ..|.|.|.||
Zfish    55 WAYSGTYGPRRWASAYPECGERNQSPVDILDPETQVSQECQELTLDGFETKSSNRTTMKNTGKTV 119

  Fly    91 --LVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGE-NDTIGSEDLINNRAYPAELHVVLR 152
              ::|..|      .|||..|    |..::.|:..||||. |.:.|||..||.:.:|.|:.:...
Zfish   120 SIVLKNDY------FVRGAGL----PGRFKAEKVEFHWGSTNGSAGSEHSINGKKFPVEMQIYFY 174

  Fly   153 NL-EYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGKSVNMTNPLPLGEYIS 216
            |. ::...::|:.:...||.||.||||..|.....|.....|.::....|..|:.:.: |.:.:.
Zfish   175 NSDDFDSLSTAIKERRIIAAMAVFFQVATKDNIAAEPIIAGLKRVVHHEKETNLGSFI-LRDLLP 238

  Fly   217 KSVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQLNAFRLL--TANDDH------LKNNFRP 273
            .|:.||:.|||||||||||:.|.||.|:.|:.::..||.||..:  |...||      |:||.||
Zfish   239 SSLGSYYRYTGSLTTPPCSKVVEWIIFSRPVYLSYHQLEAFYSIFTTEQQDHVKSVDYLRNNHRP 303

  Fly   274 IQPLNDRTLYKNYIEIPIHNMGSIPLVDA------ENAAGKWRAQAAAVLLPLVVLAALSRTSI 331
            ||.|:.|.::|:            .|:||      .:||....::..:.:...:.|..|:||::
Zfish   304 IQDLDSRRIFKS------------ALMDAWMPETMASAADTETSRVCSSIPDNMKLHPLNRTAL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 34..286 CDD:459707 91/265 (34%)
ca16bXP_021332937.1 alpha_CARP_receptor_like 62..314 CDD:239396 90/262 (34%)
FN3 340..417 CDD:214495 4/16 (25%)
PTP_DSP_cys 791..1060 CDD:475123
R-PTP-G-2 1144..1348 CDD:350508
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.